TABLE 3.
Primers pairs designed for specific amplification of E. lata DNA
| Primer pair | Sequence of primer (5′-3′) | Genomic origin | Expected PCR product size (bp) | Annealing temp (°C) |
|---|---|---|---|---|
| SCA 10A | TAGTGGTGTCAGTGAAAGG | RAPD fragment A10-410a | 350 | 60 |
| SCA 10B | GTGCTAAAGCTTAAAATCCC | RAPD fragment A10-410 | 350 | 60 |
| SCB 02A | AATCGATGTGAGAGATGG | RAPD fragment B02-830a | ||
| SCB 02B | AGGTCAATGATAGCCAAC | RAPD fragment B02-830 | 700 | 60 |
| SCD 18A | GAGTACGTTGGTACAATGG | RAPD fragment D18-530a | ||
| SCD 18B | ACTCTCTCTCGTCTTTTGC | RAPD fragment D18-530 | 450 | 60 |
| Lata 1 | GAGCTACCCTGTAGCCCGCTG | rDNA ITS1 regionb | ||
| Lata 2-1 | CTATCCGGAGATAGGCTCCC | rDNA ITS2 regionb | 302 | 65 |
| Lata 1 | GAGCTACCCTGTAGCCCGCTG | rDNA ITS1 region | ||
| Lata 2-2 | GACGTCAGCCGTGACACACC | rDNA ITS2 region | 385 | 65 |
| Lata 3 | GCCTACCCGCCGGTGGACAC | rDNA ITS1 region | ||
| Lata 2-1 | CTATCCGGAGATAGGCTCCC | rDNA ITS2 region | 281 | 65 |