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. 2000 Oct;66(10):4486–4496. doi: 10.1128/aem.66.10.4486-4496.2000

TABLE 2.

CFDA/SE staining efficiency for different bacteria

Organism Staining efficiency (%) Comments
Gram-negative organisms
 Acinetobacter johnsonii 98 ± 4 Moderately bright staining but high background fluorescence
 Alcaligenes eutrophus 61 ± 27 Faint to moderately bright staining
 Comamonas sp. strain DA001 99 ± 5
 Cytophaga pectinovora 100 ± 0 Some CFDA/SE-positive cells are not DAPI positive
 Enterobacter aerogenes 98 ± 5
 Erwinia herbicola 98 ± 5 Some very faint staining
 Escherichia coli BL 100 ± 0 Some very faint staining; some CFDA/SE-positive cells are not DAPI positive
 Flavobacterium odoratum 100 ± 0 Very good staining, some variability
 Klebsiella sp. strain 1PC 100 ± 0 Bright staining
 Pseudomonas cepacia 100 ± 0 Faint staining but still visible
 Pseudomonas fluorescens <10 Very faint staining
 Pseudomonas putida <10
 Pseudomonas sp. strain LB300 <10 Very faint staining
 Pseudomonas sp. strain To11A 100 ± 0 Faint staining but still visible
 Rahnella aquatilis BFB 100 ± 0 Moderately bright staining; some CFDA/SE-positive cells are not DAPI positive
 Sphingomonas capsulata 100 ± 0 Even staining; some CFDA/SE-positive cells are not DAPI positive
Gram-positive organisms
 Arthrobacter globiformis 100 ± 0 Very good staining; cells are more visible with CFDA/SE than with DAPI
 Bacillus subtilis 100 ± 0 Some variable staining and high background fluorescence
 Micrococcus luteus 100 ± 0 Very bright staining; some CFDA/SE-stained cells are not stained with DAPI
 Paenibacillus polymyxa FER-02 100 ± 0 Uniform; some CFDA/SE-stained cells are not stained with DAPI
 Rhodococcus rhodochrous 99 ± 5 Generally uniform staining
 Streptomyces albus <10 Very few cells are stained
 Unidentified low-G+C-content strain SO-B2 100 ± 0 Very bright staining
 Unidentified low-G+C-content strain SO-9 100 ± 0
 SO-S10 100 ± 0