Table 1.
The top 20 differentially expressed hub genes interacting with ALP genes and their expression in invasive ductal (IDC) and invasive lobular (ILC) carcinoma.
| Gene | Gene name | Chrom No.: location (bp): Strand | ILC |
IDC |
||
|---|---|---|---|---|---|---|
| pValue | logFC | pValue | logFC | |||
| ALPL | alkaline phosphatase, biominera-lization associated | chr1: 21509397-21578410:1 | 4.42 × e−3 | −1.776 | 5.47 × e−8 | −2.089 |
| ALPG | alkaline phosphatase, placental | chr2: 232406844-232410714:1 | 5.40 × e−1 | −0.122 | 7.69 × e−1 | −0.060 |
| ALPI | alkaline phosphatase, intestinal | chr2: 232456125-232460753:1 | 1.28 × e−1 | −0.237 | 2.50 × e−2 | −0.278 |
| ALPP | alkaline phosphatase, germ cell | chr2: 232378724-232382889:1 | 5.58 × e−3 | −0.122 | 1.49 × e−3 | −0.722 |
| AQPEP | Laeverin | chr5: 115962454-116027619:1 | 1.98 × e−3 | −1.866 | 3.41 × e−11 | −2.141 |
| BMP2 | Bone Morphogenetic Protein 2 | chr20: 6767686-6780246:1 | 4.94 × e−2 | −0.716 | 3.25 × e−4 | −0.723 |
| CAT | Catalase | chr11: 34438934-34472060:1 | 7.02 × e−5 | −1.801 | 4.27 × e−9 | −1.833 |
| CD34 | CD34 molecule | chr1: 207880972-207911402:-1 | 4.70 × e−3 | −1.239 | 7.15 × e−7 | −1.689 |
| COL10A1 | collagen type X alpha 1 chain | chr6:116118909-116158747:-1 | 9.27 × e−4 | 2.467 | 4.78 × e−3 | 2.208 |
| FGF10 | fibroblast growth factor 10 | chr5:44300247-44389706:-1 | 6.28 × e−4 | −1.849 | 4.85 × e−2 | −1.443 |
| FGF7 | fibroblast growth factor 7 | chr15:49423237-49488775:1 | 4.42 × e−2 | −1.050 | 6.98 × e−6 | −1.944 |
| FOLR2 | folate receptor beta | chr11:72216601-72221950:1 | 7.78 × e−3 | −2.164 | 2.96 × e−6 | −1.980 |
| GCH1 | GTP cyclohydrolase 1 | chr14:54842008-54902826:-1 | 3.13 × e−4 | 1.001 | 1.66 × e−5 | 1.194 |
| GPLD1 | glycosylphosphatidylinositol specific phospholipase D1 | chr6:24424565-24495205:-1 | 9.95 × e−3 | −1.038 | 2.42 × e-6 | −1.294 |
| IGF1 | insulin like growth factor 1 | chr12:102395874-102481744:-1 | 1.28 × e−4 | −1.335 | 2.28 × e−5 | −2.280 |
| LY6E | lymphocyte antigen 6 family member E | chr8:143017982-143023832:1 | 3.08 × e−4 | 1.272 | 1.74 × e−3 | 1.284 |
| MMP13 | matrix metallopeptidase 13 | chr11:102942995-102955732:-1 | 7.13 × e−4 | 3.069 | 7.63 × e-3 | 2.327 |
| MRAP | melanocortin 2 receptor accessory protein | chr21:32291813-32314784:1 | 8.79 × e−3 | −1.552 | 2.34 × e−10 | −1.736 |
| PPARG | peroxisome proliferator activated receptor gamma | chr3:12287368-12434356:1 | 6.33 × e−4 | −2.374 | 5.13 × e−11 | −2.730 |
| RUNX2 | RUNX family transcription factor 2 | chr6:45328157-45664349:1 | 2.39 × e−3 | 1.445 | 2.72 × e−2 | 1.115 |