Table 4.

Dictionary space in total GB and average bits/k-mer (bpk)

Dictionary	Cod		Kestrel		Human		Bacterial
	GB	bpk	GB	bpk	GB	bpk	GB	bpk
dBG-FM, s = 128	0.22	3.48	0.44	3.07	—	—	—	—
dBG-FM, s = 64	0.27	4.38	0.55	3.86	—	—	—	—
dBG-FM, s = 32	0.39	6.16	0.78	5.43	—	—	—	—
Pufferfish, sparse	1.75	27.80	3.69	25.66	8.87	28.32	18.91	28.28
	1.49	23.70	3.37	23.40	7.50	23.96	16.09	24.06
Pufferfish, dense	2.69	42.76	5.97	41.54	14.11	45.04	30.70	45.89
	2.43	38.66	5.65	39.28	12.74	40.68	27.88	41.68
Blight, b = 4	0.91	14.53	2.16	15.00	5.04	16.11	11.40	17.04
Blight, b = 2	1.04	16.57	2.45	17.04	5.67	18.13	12.74	19.05
Blight, b = 0	1.17	18.61	2.74	19.06	6.32	20.17	14.12	21.11
SSHash, regular	0.44	6.98	0.93	6.48	2.59	8.28	5.50	8.22
SSHash, canonical	0.50	7.92	1.00	7.30	2.94	9.39	6.17	9.22