Table 7.
Dictionary construction times in minutes (using a single processing thread) and peak internal memory used during construction in GB (blight’s performance was the same for all values of b in the experiment)
Dictionary | Cod |
Kestrel |
Human |
Bacterial |
||||
---|---|---|---|---|---|---|---|---|
Min | GB | Min | GB | Min | GB | Min | GB | |
dBG-FM, s = 128 | 28.5 | 0.5 | 100.0 | 0.7 | — | — | — | — |
dBG-FM, s = 64 | 28.5 | 0.6 | 100.0 | 0.9 | — | — | — | — |
dBG-FM, s = 32 | 28.5 | 0.7 | 100.0 | 1.1 | — | — | — | — |
Pufferfish, sparse | 15.5 | 3.3 | 35.2 | 6.7 | 86.0 | 19.4 | 200.8 | 40.1 |
Pufferfish, dense | 13.0 | 2.8 | 29.2 | 5.9 | 70.7 | 14.0 | 173.2 | 30.4 |
Blight | 5.0 | 3.3 | 11.0 | 7.0 | 25.0 | 7.5 | 50.0 | 15.8 |
SSHash, regular | 1.5 | 2.6 | 3.8 | 5.7 | 12.5 | 15.4 | 29.6 | 33.4 |
SSHash, canonical | 2.0 | 2.8 | 4.4 | 5.8 | 16.2 | 17.3 | 36.0 | 36.6 |