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. 2000 Nov;66(11):4725–4734. doi: 10.1128/aem.66.11.4725-4734.2000

TABLE 3.

RFLPs of ITS regions for basidiomycetes

Species and isolate(s)a RFLPs (bp) obtained with:
AluI HaeIII TaqI TaqI-HaeIII Uncut ampliconb
Brown-rot basidiomycetes
Coniophora puteana 500 470 530 247
  Fp-90099-Sp 187 242 185 197
170 114 71 182
91 59 69
23 59
41
23
  Total 948 908 786 813 970
Fomitopsis pinicola 380 545 310 248
  K8Sp 200 127 203 165
90 98 165 107c
52 62 130 62
  Total 722 832 870 796 930
Gloeophyllum trabeum 435 670 500 420
  This lab 155 107 318 215
  Mad-617-R 105 72 72 107
  ATCC 11539 86 72
  Total 781 849 890 814 890
Gloeophyllum sepiarum 435 670 500 420
  10-BS2-2 155 107 170 140
105 72 140 107
86 72 72
  Total 781 849 882 739 890
Leucogyrophana pinastri 580 320 400 245
  This lab 300 245 180 127
100 170 127 95
140 95 72
63 78 63
55 63 37
  Total 980 993 943 639 1,050
Postia placenta 448 610 530 445
  This lab 240 110d 335 115d
  Mad-698-R 100 72 72 72
  Total 788 902 937 747 930
Serpula lacrimans 810 800 485 485
  Harm-888-R 100 108 215 215
  ATCC 36335 81 77
68 68
50 39
  Total 910 908 899 884 930
White-rot basidiomycetes
Irpex lacteus
  KTS 003 500 425 270 245
  ATCC 60993 105 345 245 140
93 105 150 108
61 108 77
77 61
61
  Total 698 936 911 631 960
Lentinula edodes 515 860 540 540
  117=lt(d) 235 102 355 255
105 50 60 102
60
Phanerochaete chrysosporium 515 705 385 385
  This lab 165 98 315 220
94 50 98 98
65 65
  Total 774 853 863 768 850
Phanerochaete chrysosporium 515 705 330 330
  ATCC 24725 165 98 300 208
94 50 98 98
59 59
32 32
  Total 774 853 819 727 850
Resinicium bicolor 380 800 270 270
  HHB-8850-sp 150 50 245 245
  ATCC 44175 98 215 215
  ATCC 64897 69 60 60
  Total 697 850 790 790 850
Scytinostroma galactinum 595 540 315 315
  MB-1880-sp 204 268 200 137
94 60 164 116
75 75
60 60
50
  Total 893 868 814 753 930
Scytinostroma galactinum 595 540 220 220
  ATCC 44178 204 268 200 137
94 60 116 116
91 91
75 75
60 60
50
  Total 893 868 762 749 930
Scytinostroma galactinum 595 540 200 137
  ATCC 64896 204 268 137 116
94 60 116 91
91 75
75 60
60 50
  Total 893 868 679 529 930
Trametes versicolor 360 300d 320 260
  This lab 146 105 172 135
93 70 74 108
74 74
58 50
  Total 731 775 566 627 910
Trametes versicolor 360 300d 320 255
  Fp-101664-Sp 146 210 172 205
93 70 74 135
74 113
58 74
50
  Total 731 880 566 832 910
Trichaptum abietinum 405 900 470 335
  1247 MJL 365 310 335 145
215 145 53 62
155 53
50
  Total 1,190 1,408 858 542 1,460
Ectomycorrhiza
Pisolithus tinctorius 435 605 208 208
  ATCC 38054 182 170 150 127
165 59 127 100
87 76 69
59 59
23 44
23
  Total 869 834 643 630 890
Soil-borne pathogen of herbaceous plants
Rhizoctonia solani 415 620 500 335
  1AP 245 260 335 260
98 59 242
83 59
  Total 841 880 894 896 970
a

All isolates of a species which have identical RFLP profiles per restriction endonuclease for all enzymes are listed together. If different isolates of a species have different RFLP profiles for at least one of the restriction endonucleases, then those isolates are listed separately. 

b

Amplicon of the ITS region amplified by primers ITS1-F (specific for higher fungi) and ITS4-B (specific for basidiomycetes). 

c

This fragment is a triplet, as reflected in the fragment total. 

d

This fragment is a doublet, as reflected in the fragment total.