Table 4. Mammalian adaptation–related molecular markers of the human and nonhuman A(H5N6) viruses, China.
Protein | Biologic effect | Mutations | Amino acids | Human viruses | Nonhuman viruses |
---|---|---|---|---|---|
HA* |
Altered receptor specificity | T192I | T | 22 | 1,238 |
A | 2 | 24 | |||
I | 18 | 36 | |||
K | 0 | 2 | |||
Altered receptor specificity | Q226L | Q | 39 | 1,302 | |
L | 2 | 0 | |||
Q\R | 1 | 0 | |||
Altered receptor specificity | S2227N/R | S | 6 | 136 | |
G | 3 | 31 | |||
H | 1 | 2 | |||
H/R | 2 | 0 | |||
Q | 0 | 92 | |||
R | 30 | 1,036 | |||
C | 0 | 4 | |||
Altered receptor specificity |
G228S |
G |
42 |
1,302 |
|
NA† |
Reduced susceptibility to neuraminidase inhibitors |
E119V/A/D |
E | 41 | 1,253 |
D | 1 | 34 | |||
G |
0 |
1 |
|||
M2 |
Reduced susceptibility to amantadine | V27A | V | 41 | 1,154 |
A | 1 | 20 | |||
G | 0 | 9 | |||
I | 0 | 15 | |||
Reduced susceptibility to amantadine | A30V/T/S | A | 41 | 1,197 | |
A/T | 1 | 0 | |||
S | 0 | 1 | |||
Reduced susceptibility to amantadine |
S31N/G |
S | 33 | 994 | |
N |
9 |
204 |
|||
PA |
Reduced susceptibility to endonuclease inhibitors |
I38M/T/S/L |
I | 39 | 1,181 |
L | 0 | 1 | |||
M | 0 | 1 | |||
V |
1 |
1 |
|||
PB2 |
Increased virulence in mammalian models | Q591K | Q | 40 | 1,194 |
K | 1 | 0 | |||
Increased virulence in mammalian models | E627K | E | 28 | 1,180 | |
K | 12 | 3 | |||
E/V | 1 | 1 | |||
V | 0 | 9 | |||
Increased virulence in mammalian models |
D701N |
D | 36 | 1,193 | |
D/N | 1 | 0 | |||
N |
4 |
0 |
|||
NS1 |
Altered virulence in mice | D92E | D | 18 | 185 |
E | 24 | 1,011 | |||
G | 0 | 1 | |||
Altered virulence in mice | L103F | L | 8 | 165 | |
F | 26 | 1,020 | |||
S | 0 | 11 | |||
V | 7 | 1 | |||
Y | 1 | 0 | |||
Altered virulence in mice |
I106M |
I | 8 | 166 | |
K | 0 | 4 | |||
M |
34 |
1,027 |
|||
M1 | Altered virulence in mice | N30D | D | 42 | 1,200 |
Impacts growth and transmission in the guinea pig | P41A | A | 42 | 1,199 | |
S | 0 | 1 | |||
Altered virulence in mice | T139A | T | 40 | 1,113 | |
A | 2 | 58 | |||
P | 0 | 29 | |||
Altered virulence in mice | T215A | A | 42 | 1,200 |
*H3 numbering system was used. †N2 numbering system was used.