Table 1.
List of structural neighbors of TBEV pr found by the Dali server31, 65 sorted by Z-score. Only matches with Z-score > 2.8 are listed.
| PDB-chain | Z | rmsd | lali | nres | %id | Description |
|---|---|---|---|---|---|---|
| 6epk-B | 15.5 | 0.9 | 79 | 80 | 29 | YFV pr – X-ray structure |
| 3c5x-C | 12.4 | 1.6 | 77 | 81 | 25 | DENV2 pr X-ray structure |
| 5u4w-F | 12.5 | 1.6 | 77 | 81 | 23 | ZIKV pr from the cryo-EM structure of the immature virion |
| 6zqi-B | 11.7 | 1.3 | 78 | 101 | 36 | SPOV pr from the cryo-EM structure of the immature virion |
| 7l30-b | 11.5 | 1.5 | 74 | 150 | 42 | BINJV pr from the cryo-EM structure of the immature virion |
| 2b26-B | 3.5 | 2.7 | 53 | 147 | 6 | Yeast HSP40-SIS1- fragment C-terminal domain |
| 3agx-B | 3.5 | 3.1 | 47 | 148 | 6 | Human HSP40-Hdj1 peptide binding domain |
| 1xao-A | 3.4 | 2.7 | 50 | 115 | 6 | Yeast HSP40-Ydj1 dimerization domain |
| 7jtk-Y | 3.2 | 2.6 | 52 | 213 | 10 | Chlamydomonas ReinhardtII HSP40 - flagellar radial spoke protein |
| 3agz-A | 3.2 | 2.7 | 53 | 185 | 9 | Human HSP40-Hdj1 peptide binding domain |
| 2q2g-A | 3.2 | 2.8 | 54 | 176 | 11 | Cryptosporidium parvum HSP40 dimerization domain |
| 6jzb-A | 3.2 | 2.8 | 51 | 251 | 6 | Streptococcus Pneumoniae Type I HSP40 - DnaJ |
| 1nlt-A | 3.1 | 2.8 | 52 | 228 | 6 | Yeast HSP40-Ydj1 |
| 1c3g-A | 3.0 | 2.5 | 51 | 170 | 6 | Yeast HSP40-Sis1 - C-terminal peptide binding domain |
| 4j80-A | 2.9 | 2.7 | 50 | 271 | 12 | Thermus Thermophilus Chaperone protein DnaJ-2 |