Skip to main content
. 2022 May 2;7(3):e00009-22. doi: 10.1128/msphere.00009-22

FIG 4.

FIG 4

Percent coverage of a nonenriched T. pallidum Nichols isolate control containing 1,063.1 ± 45.22 T. pallidum genomic copies/μL of DNA extract, NEB+MDA-enriched clinical isolate CDC-SF003, and SWGA-enriched clinical specimens sequenced using the Illumina MiSeq v2 (500- cycle) platform. The percentages of T. pallidum reads are derived from down-selected T. pallidum reads. Prefiltered reads for Nichols-CDC were mapped to the Nichols reference genome (GenBank version number NC_000919.1). The prefiltered reads in all clinical isolates and specimens were mapped against the SS14 reference genome (GenBank version number NC_021508.1).