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. Author manuscript; available in PMC: 2023 Mar 8.
Published in final edited form as: J Chem Theory Comput. 2022 Feb 11;18(3):1359–1381. doi: 10.1021/acs.jctc.1c00590

Figure 8:

Figure 8:

None of our simulations could rehydrate Site 1 (red), though they could rehydrate Sites 2-3 (blue, green) in (A) The HSP90 system (PDB: 3RLQ). Bar graphs show the water occupancy of target sites in a single (B) BLUES simulation (with ordered water molecules removed prior to simulation), (C) grand simulation, and (D) unbiased MD simulation.