TABLE 3.
Distributions of predicted coding sequence function and potential virulence genes in the annotated genome of S. oriscaviae HKU75T
| Genome features | ||
|---|---|---|
| Subsystema | No. of subsystems | No. of genes |
| Class | ||
| Metabolism | 60 | 337 |
| Protein processing | 39 | 195 |
| Stress response, defense, virulence | 24 | 75 |
| DNA processing | 17 | 78 |
| Energy | 14 | 77 |
| RNA processing | 12 | 45 |
| Membrane transport | 10 | 24 |
| Cellular processes | 9 | 38 |
| Regulation and cell signaling | 3 | 9 |
| Cell envelope | 2 | 5 |
| Miscellaneous | 1 | 1 |
| Virulence factorsb | Gene | Locus tag |
| Class | ||
| Adherence | Alpha-glucosyltransferase (gftA)c | INT76_01865 |
| Collagen binding protein (cpbA) | INT76_08030 | |
| Fibronectin-binding proteins (pavA) | INT76_02425 | |
| Laminin-binding protein (lmb) | INT76_05165 | |
| Sortase A (srtA) | INT76_02095 | |
| Streptococcal lipoprotein rotamase A (slrA) | INT76_10040 | |
| Streptococcal plasmin receptor/GAPDH (plr/gapA) | INT76_05895 | |
| Enzyme | Hyaluronidase (hysA) | INT76_10670 |
| Streptococcal enolase (eno) | INT76_02460 | |
| Protease | C5a peptidase (scpA/scpB) | INT76_05155 |
| Serine protease (htrA/degP) | INT76_07235 | |
| Trigger factor (tig/ropA) | INT76_05170 | |
| Zinc metalloproteinase (zmpC) | INT76_08495 |