TABLE 1.
No. | Isolate | Date of isolation (day-mo-yr) | Allele profile |
ST | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Chromosome I genes |
Chromosome II genes |
|||||||||
dnaE | gyrB | recA | dtdS | pntA | pyrC | tnaA | ||||
1 | MUVP1 | 22/08/2016 | 28 | 39 | 230 | 19 | 253a | 62 | 1 | 1922a |
2 | MUVP2 | 22/08/2016 | 158 | 23 | 153 | 74 | 66 | 154 | 33 | 1309 |
3 | MUVP3 | 22/08/2016 | 341 | 51 | 98 | 444a | 26 | 170 | 64 | 2011a |
4 | MUVP4 | 5/9/2016 | 158 | 23 | 153 | 74 | 66 | 154 | 33 | 1309 |
5 | MUVP5 | 5/9/2016 | 158 | 23 | 153 | 74 | 66 | 154 | 33 | 1309 |
6 | MUVP6 | 5/9/2016 | 158 | 23 | 153 | 74 | 66 | 154 | 33 | 1309 |
7 | MUVP7 | 5/9/2016 | 158 | 23 | 153 | 74 | 66 | 154 | 33 | 1309 |
8 | MUVP8 | 5/9/2016 | 158 | 507a | 144 | 445a | 254a | 419a | 266a | 1923a |
9 | MUVP9 | 3/10/2016 | 28 | 106 | 82 | 251 | 18 | 38 | 2 | 985 |
10 | MUVP10 | 17/10/2016 | 10 | 508a | 15 | 446a | 132 | 11 | 2 | 1924a |
11 | MUVP11 | 17/10/2016 | 5 | 106 | 59 | 78 | 50 | 328 | 17 | 1919 |
12 | MUVP12 | 31/10/2016 | 234 | 285 | 74 | 278 | 61 | 78 | 57 | 1925a |
13 | MUVP13 | 31/10/2016 | 234 | 285 | 74 | 278 | 61 | 78 | 57 | 1925a |
14 | MUVP14 | 31/10/2016 | 234 | 285 | 74 | 278 | 61 | 78 | 57 | 1925a |
15 | MUVP15 | 31/10/2016 | 341 | 51 | 98 | 253 | 26 | 418a | 24 | 1926a |
16 | MUVP16 | 30/01/2017 | 35 | 154 | 31 | 78 | 26 | 277 | 258 | 1927a |
17 | MUVP17 | 30/01/2017 | 35 | 154 | 31 | 78 | 26 | 277 | 258 | 1927a |
18 | MUVP18 | 14/02/2017 | 158 | 23 | 153 | 74 | 66 | 154 | 33 | 1309 |
19 | MUVP19 | 14/02/2017 | 5 | 84 | 31 | 88 | 26 | 45 | 24 | 1928a |
20 | MUVP20 | 13/03/2017 | 248 | 506a | 98 | 185 | 26 | 382 | 26 | 1929a |
21 | MUVP21 | 27/03/2017 | 3 | 82 | 62 | 180 | 30 | 7 | 267a | 1930a |
22 | MUVP22 | 27/03/2017 | 11 | 48 | 107b | 48 | 26 | 48 | 26 | 2516 |
23 | MUVP23 | 27/03/2017 | 11 | 48 | 107b | 48 | 26 | 48 | 26 | 2516 |
24 | MUVP24 | 27/03/2017 | 11 | 48 | 107b | 48 | 26 | 48 | 26 | 2516 |
25 | MUVP25 | 27/03/2017 | 42 | 147 | 276b | 136 | 66 | 296 | 214 | 2242a |
26 | MUVP26 | 14/11/2016 | 167 | 242 | 109 | 19 | 28 | 37 | 12 | 2229a |
27 | MUVP27 | 14/11/2016 | 11 | 106 | 192 | 220 | 71 | 73 | 17 | 1352 |
28 | MUVP28 | 14/11/2016 | 36 | 285 | 292 | 13 | 49 | 227 | 24 | 2230a |
29 | MUVP29 | 14/11/2016 | 36 | 285 | 292 | 13 | 49 | 227 | 24 | 2230a |
30 | MUVP30 | 28/11/2016 | 3 | 25 | 60 | 144 | 31 | 128 | 26 | 288 |
31 | MUVP31 | 28/11/2016 | 28 | 4 | 82 | 88 | 63 | 187 | 1 | 799 |
32 | MUVP32 | 13/12/2016 | 31 | 221 | 395a | 487a | 26 | 45 | 23 | 2243a |
33 | MUVP33 | 13/12/2016 | 404a | 187 | 31 | 488a | 43 | 116 | 187 | 2244a |
34 | MUVP34 | 13/12/2016 | 403a | 153 | 243 | 489a | 272a | 443a | 26 | 2245a |
35 | MUVP35 | 13/12/2016 | 33 | 69 | 57 | 402 | 46 | 37 | 24 | 2231a |
36 | MUVP36 | 30/01/2017 | 377 | 147 | 67 | 206 | 23 | 37 | 280a | 2246a |
37 | MUVP37 | 30/01/2017 | 35 | 154 | 31 | 78 | 26 | 277 | 258 | 1927a |
38 | MUVP38 | 30/01/2017 | 7 | 106 | 67 | 430 | 3 | 270 | 62 | 2233a |
39 | MUVP39 | 30/01/2017 | 291 | 129 | 25 | 39 | 18 | 3 | 20 | 2239a |
40 | MUVP40 | 14/02/2017 | 291 | 129 | 25 | 29 | 18 | 11 | 20 | 1879 |
41 | MUVP41 | 27/02/2017 | 363 | 381 | 31 | 39 | 18 | 3 | 20 | 2240a |
42 | MUVP42 | 13/03/2017 | 28 | 177 | 140 | 390 | 45 | 257 | 54 | 2247a |
43 | MUVP43 | 13/03/2017 | 363 | 246 | 19 | 91 | 246 | 10 | 26 | 2241a |
44 | MUVP45 | 28/04/2017 | 402a | 282 | 67 | 76 | 23 | 99 | 2 | 2248a |
45 | MUVP46 | 28/04/2017 | 28 | 106 | 82 | 204 | 18 | 7 | 26 | 491 |
46 | MUVP47 | 28/04/2017 | 3 | 82 | 126 | 69 | 30 | 7 | 23 | 260 |
47 | MUVP48 | 28/04/2017 | 42 | 147 | 276b | 136 | 66 | 296 | 214 | 2242a |
48 | MUVP49 | 28/04/2017 | 167 | 58 | 396a | 181 | 113 | 46 | 26 | 2249a |
49 | MUVP50 | 28/04/2017 | 167 | 58 | 396a | 181 | 113 | 58 | 26 | 2250a |
Novel alleles or sequence types (STs).
Atypical recA alleles of V. parahaemolyticus (30).