TABLE 2.
Sequence types in clonal complexes and single-locus variants closely related to V. parahaemolyticus isolates from aquatic bird feces (https://pubmlst.org/)a
| CC or doublet | STs | Frequency (no. of strains)b | Country (no. of strains) | Yr of isolation | Source(s) (no. of strains)c |
|---|---|---|---|---|---|
| 2516 | 2516 | 64 | Thailand (4), China (54), Peru (4), Norway (1), USA (1) | 1990–2018 | B (3), C (58), E (3) |
| 189 | 30 | Thailand (1), China (24), India (2), Japan (2), USA (1) | 1984–2017 | C (27), E (3) | |
| 88 | 5 | Peru (3), USA (1), Bangladesh (1) | 1982–1997 | C (4), E (1) | |
| 345 | 1 | China | 2010 | C | |
| 812 | 2 | China | 2008 | C | |
| 962 | 1 | China | 2008 | C | |
| 1533 | 1 | China | 2014 | C | |
| 1647 | 2 | China | 2014 | C | |
| 1648 | 1 | China | 2014 | C | |
| 799 | 799 | 4 | Thailand (1), USA (2), China (2) | 2006–2021 | B (1), C (1), E (3) |
| 8 | 38 | China (19), Japan (2), Philippines (1), India (1), Thailand (1), USA (12), Canada (2) | 1984–2021 | C (30), E (8) | |
| 501 | 1 | China | 2008 | E | |
| 1108 | 1 | China | 2006 | E | |
| 1352 | 1352 | 1 | Thailand | 2016 | B |
| 530 | 1 | China | 2006 | C | |
| 1244 | 1 | China | 2013 | E | |
| 1245 | 1 | China | 2013 | E | |
| 1309 | 1309 | 8 | Thailand (6), China (2) | 2009–2017, 2009 | B (6), E (2) |
| 379 | 1 | China | 2005 | E | |
| 965 | 1 | China | 2010 | E | |
| 260 | 260 | 2 | Thailand | 2017, 2003 | B (1), E (1) |
| 1660 | 2 | China | 2014 | C (1), E (1) | |
| 288 | 288 | 6 | Thailand (1), China (4), USA (1) | 2007–2021 | B (1), E (5) |
| 1826 | 1 | China | 2014 | E | |
| 1922 | 1922 | 1 | Thailand | 2016 | B |
| 1,665 | 1 | China | 2014 | E | |
| 2239 | 2239 | 1 | Thailand | 2017 | B |
| 2347 | 1 | China | 2016 | E | |
| 2240 | 2240 | 1 | Thailand | 2017 | B |
| 988 | 1 | China | 2006 | E | |
| 2249 | 2249 | 1 | Thailand | 2017 | B |
| 2250 | 1 | Thailand | 2017 | B |
a
CC, clonal complex; ST, sequence type.
b
Number of strains in the V. parahaemolyticus MLST database, including the isolates identified in this study.
c
C, clinical; E, environmental; B, bird feces; NA, information not available.