FIG 2.

β-lactam resistance phenotypes and in silico resistance determinant identification show a large burden of ARGs. (A) Midpoint-rooted rectangular representation of the same tree in Fig. 1B annotated with MLST group. Branch colors depicting Group A (red), Group B (blue), and Group C (green) have been reproduced. (B) The tree is annotated with the interpretation of AST results (magenta) and the presence/absence matrix of β-lactam ARGs (red), determined by NCBI AMRfinder. ARGs are hierarchically clustered by Euclidean distance, with the dendrogram shown on the left axis. FEP = cefepime, CAZ = ceftazidime, CZA = ceftazidime-avibactam, TZP = piperacillin-tazobactam, C/T = ceftolozane-tazobactam, ATM = aztreonam, MEM = meropenem, IPM = imipenem, CIA = carbapenem inactivation assay.