Table 3.

Classified statistics of repeat sequences of S. maximus.

	RepBase TEs		TE Proteins		De novo		Combined TEs
	Length (bp)	% in Genome	Length (bp)	% in Genome	Length (bp)	% in Genome	Length (bp)	% in Genome
DNA	38,217,303	7.10	2,321,886	0.43	23,128,062	4.30	54,159,141	10.06
LINE	13,026,936	2.42	6,871,234	1.28	7,405,321	1.38	16,693,988	3.10
SINE	2,309,601	0.43	0	0	857,212	0.16	2,740,574	0.51
LTR	11,363,027	2.11	2,222,887	0.41	4,790,157	0.89	15,901,294	2.95
Satellite	2,989,136	0.56	0	0	499,041	0.09	3,462,111	0.64
Simple_repeat	0	0	0	0	0	0	0	0
Other	2,814	0	135	0	0	0	2,949	0
Unknown	537,749	0.10	13,890	0	23,176,727	4.31	23,566,810	4.38
Total	58,685,000	10.90	11,419,271	2.12	58,413,629	10.85	104,452,847	19.41