Table 9. Postsimulation Binding Free Energy Calculation of Compound 27.
complex detail | MMGBSA ΔG bind | MMGBSA ΔG bind Coulomb | MMGBSA ΔG bind Hbond | MMGBSA ΔG bind Lipo | MMGBSA ΔG bind packing | MMGBSA ΔG bind vdW |
---|---|---|---|---|---|---|
at 10 ns | –87.78 | –17.009 | –0.974 | –29.699 | –4.086 | –52.885 |
at 20 ns | –85.41 | –18.424 | –1.015 | –27.228 | –2.497 | –53.606 |
at 30 ns | –77.70 | –10.923 | –0.685 | –28.180 | –4.794 | –51.507 |
at 40 ns | –82.74 | –12.108 | –0.692 | –28.834 | –4.796 | –50.101 |
at 50 ns | –69.77 | –9.402 | –0.465 | –25.391 | –4.264 | –45.616 |
at 60 ns | –74.29 | –6.559 | –0.463 | –26.718 | –4.0120 | –48.644 |
at 70 ns | –73.11 | –12.185 | –0.597 | –25.710 | –4.781 | –45.266 |
at 80 ns | –77.25 | –10.276 | –0.640 | –25.762 | –3.735 | –49.196 |
at 90 ns | –81.46 | –9.165 | –0.515 | –27.805 | –3.642 | –52.073 |
at 100 ns | –80.123 | –10.553 | –0.578 | –26.822 | –4.312 | –50.787 |
average | –78.9690 | –11.660 | –0.662 | –27.215 | –4.092 | –49.968 |