Table 2.
Secretomes from Ax4 grown in LB or VB were prepared in triplicate and subjected to mass spectrometry analysis.
Putative Protein IDs | Unique peptides | Sequence coverage [%] | Fold change | Protein IDs | |
---|---|---|---|---|---|
T6SS (TAX-1) | Colicin-E1–like effector | 4 | 6.8 | 5.59 | A0A0M7DM80 |
VgrG1a | 24 | 37 | 73.75 | A0A0M7DL97 | |
Hcp1 | 13 | 75.4 | 6.92 | A0A0D6HUB7;E3HG87 | |
VgrG1b + effector | 4 | 2.8 | 12.04 | E3HG94 | |
Effector domain | 7 | 19.6 | 9.69 | A0A0M7DKW2 | |
VgrG1c | 32 | 47.6 | 50.74 | A0A0M9I2Z4 | |
PAAR | 3 | 8.8 | 5.31 | A0A0M7DJN0 | |
T3SS | CesT | 4 | 29.6 | 8.53 | A0A0M7IUG8 |
SepL | 11 | 35.2 | 11.15 | A0A0M7KMF7 | |
EscI | 6 | 42 | 2.85 | A0A0M7KQZ8 | |
Flagella | FliC | 24 | 56.8 | −3.00 | A0A0M7L493 |
FlgB | 3 | 40.3 | −2.83 | A0A0M7M335;E3HSC4 | |
FlgC | 9 | 89.9 | −5.12 | A0A0D6HEK3;E3HSC5 | |
FlgD | 16 | 71.9 | −3.95 | A0A0M7KIR8;E3HSC6 | |
FlgE | 14 | 45.5 | −4.20 | A0A0M7PS44;E3HSC7 | |
FlgF | 12 | 64.8 | −4.76 | A0A0D6HCP9;E3HSC8 | |
FlgG | 7 | 27.6 | −5.31 | A0A0M7M879;E3HSC9 | |
FlgK | 18 | 37.5 | −4.93 | A0A0M7K095;E3HSD3 | |
FlgL | 23 | 59.4 | −4.67 | A0A0D6HE69 | |
FliK | 12 | 32.7 | −5.23 | A0A0M7F370;E3HSE7 | |
FliE | 3 | 45.5 | −4.65 | A0A0D6HCW3;E3HSF3 | |
FliD | 24 | 41 | −2.87 | A0A0M7D2V8 | |
FlaG | 2 | 15.2 | −6.12 | A0A0M7NYY5 |
Protein included in TAX-1, T3SS, or flagella group are selected among significantly enriched in one growth condition.