TABLE 3.
One overlapping region detected by comparing integrated haplotype score (iHS) analysis in Nguni and iHS analysis Bonsmara populations (p < 0.0001).
| BTA | Start (Mb) | End (Mb) | Genes common to both | Genes unique to Nguni | QTLS relating to | ||
|---|---|---|---|---|---|---|---|
| Growth | Reproduction | Disease | |||||
| 5 | 105.6 | 107.5 | PARP11, CRACR2A, PRMT8, TSPAN11, TSPAN9, TEAD4, RHNO1, FOXM1, TEX52, NRIP2, ITFG2, FKBP4, WASHC1, IQSEC3 | C5H12orf4, FGF6, FGF23, TIGAR, CCND2, SLC6A12, SLC6A13, KDM5A, CCDC77, B4GALNT3, SNORA70, NINJ2 | Average daily gain (QTL:164,654) | Stature (QTL:154,109) | Bovine respiratory disease susceptibility (QTL:160,084) |
| Metabolic body weight (QTL:188,728) | Pelvic area (QTL:106,466) | Dystocia (QTL:14,701) | |||||
| Length of productive life (QTL:122,677) | Scrotal circumference (QTL:139,011) | Bovine tuberculosis susceptibility (QTL:167,792) | |||||
| Body weight gain (QTL:67,109) | Calf size (QTL:30,494) | ||||||
| Hip height (QTL:172,045) | Calving ease (QTL:40,773) | ||||||
| Conception rate (QTL:176,997) | |||||||
| Daughter pregnancy rate (QTL:40,769) | |||||||
| Lactation persistency (QTL:125,220) | |||||||