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. 2022 Jul 1;20:92. doi: 10.1186/s43141-022-00383-8

Table 6.

3D structure evaluation by different online tools

Name PROCHECK score ERRAT quality score Verify_3D PROVE_score
Wild

Out of 8 evaluations

• 1: Errors

• 4: Warning

• 3: Pass

98.4

100.00% of amino acids have 3D-1D average score > = 0.2

Pass

Total buried outlier atoms of protein: 1.3%
T88N

Out of 8 evaluations

• 1: Errors

• 4: Warning

• 3: Pass

99.2

100.00% of amino acids have 3D-1D average score > = 0.2

Pass

Total buried outlier atoms of protein: 1.3%
I74T

Out of 8 evaluations

• 1: Errors

• 4: Warning

• 3: Pass

97.6

100.00% of amino acids have 3D-1D average score > = 0.2

Pass

Total buried outlier atoms of protein: 1.8%
F75I

Out of 8 evaluations

• 1: Errors

• 4: Warning

• 3: Pass

97.6

100.00% of amino acids have 3D-1D average score > = 0.2

Pass

Total buried outlier atoms of protein: 1.3%
D67H

Out of 8 evaluations

• 1: Errors

• 4: Warning

• 3: Pass

98.4

100.00% of amino acids have 3D-1D average score > = 0.2

Pass

Total buried outlier atoms of protein: 1.5%
W82R

Out of 8 evaluations

• 1: Errors

• 4: Warning

• 3: Pass

99.2

100.00% of amino acids have 3D-1D average score > = 0.2

Pass

Total buried outlier atoms of protein: 1.3%
D85H

Out of 8 evaluations

• 1: Errors

• 4: Warning

• 3: Pass

99.2

100.00% of amino acids have 3D-1D average score > = 0.2

Pass

Total buried outlier atoms of protein: 1.3%
R80C

Out of 8 evaluations

• 1: Errors

• 4: Warning

• 3: Pass

99.2

100.00% of amino acids have 3D-1D average score > = 0.2

Pass

Total buried outlier atoms of protein: 1.3%
R116S

Out of 8 evaluations

• 1: Errors

• 4: Warning

• 3: Pass

98.4

100.00% of amino acids have 3D-1D average score > = 0.2

Pass

Total buried outlier atoms of protein: 1.3%