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. 2022 Jun 17;9:904740. doi: 10.3389/fnut.2022.904740

TABLE 3.

Upstream regulator analysis of factors controlling metabolic homeostasis in the liver.

HFD + vehicle vs Chow HFD + 2′-FL vs HFD + vehicle

Z-score p-value Z-score p-value
ACOX1 −5.8 0.000 2.2 0.037
AMPK −2.2 0.000 N/A 1.000
ATF4 1.9 0.000 −2.6 0.000
ATF6 0.5 0.007 −1.9 0.000
ERN1 0.9 0.037 −2.4 0.009
NRF1 −0.9 0.000 0.6 0.000
NUPR1 2.8 0.000 −1.2 0.005
PPARGC1A −4.2 0.000 0.1 0.005
PRKCD 3.8 0.000 −2.4 0.011
SREBF1 0.2 0.000 −1.7 0.005

The activity of an upstream regulator was predicted based on gene expression changes of all downstream target genes. A negative Z-score indicates inhibition of the respective regulator or pathway (green color) and a positive Z-score indicates activation (red color). The p-value < 0.05 in gray indicates significant enrichment of the target genes downstream of a regulator, i.e., that more downstream genes are affected than can be expected by chance. N/A indicates an insufficient number of differentially expressed genes to predict the activation state of an upstream regulator.