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. 2022 Jun 14;25(7):104589. doi: 10.1016/j.isci.2022.104589
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Anti-Myosin Heavy Chain antibody, clone A4.1025 Millipore Cat#05–716; RRID:AB_309930
Anti-Tead1 (TEF-1 Pure) BD Biosciences Cat# 610922; RRID:AB_398237
Anti-IgG Millipore Cat# Magna 0014
Anti-APJ receptor antibody Abcam Cat# ab214369
Anti-Apelin antibody Abcam Cat# ab125213 RRID:AB_10999708
Anti-Laminin antibody LS Bio Cat# LS-C96142 RRID:AB_2033342
Anti-CD31 (Pecam1) antibody BD Biosciences Cat# 557355 RRID:AB_396660

Critical commercial assays

One-Glo Firefly Luciferase Detection Kit Promega Cat# E8120
Nano-Glo Dual-Luciferase Detection Kit Promega Cat# N1620
Glo-lysis Buffer Promega Cat# E2661
Lipofectamine RNAiMax Thermofisher Cat# S-006-100
Apelin EIA kit Phoenix pharmaceuticals Cat# EK-057-23
Gibson assembly kit NEB Cat# E5510
FastLane cell multiplex NR kit Qiagen Cat# 216713
miRNeasy Mini Kit Qiagen Cat# 217004
Covaris truChIP chromatin shearing kit Covaris Cat# SKU:500465
Magna ChIP A/G kit Millipore/Sigma Cat#17–10085
Minielute DNA purification kit Qiagen Cat# 28004
Maxima Sybr Green/ROX master mix Thermo Scientific Cat# K0221

Chemicals, peptides, and recombinant proteins

Recombinant Phy Apelin-13 Bachem Cat# U-01260
Cardiotoxin Laxotan Cat# L8102
Notexin Laxotan Cat# L8104

Deposited data

GSE1133 bioGPS GeneAtlas UI33A (gcrma) for human samples
GSE1133 bioGPS GeneAtlas MOE430 (gcrma) for mouse tissues
GSE45577 GEO (Lukjanenko et al., 2013)
https://doi.org/10.1371/journal.pone.0071084
GSE143435, GSE143437, GSE159500 GEO (McKellar et al., 2021)
https://doi.org/10.1101/2020.12.01.407460

Experimental models: Cell lines

C2C12 myoblast cell line ATCC Cat# CRL1772 RRID:CVCL_0188
C166 endothelial cell line ATCC Cat# CRL2581 RRID:CVCL_6581
EOMA endothelial cell line ATCC Cat# CRL2586 RRID:CVCL_3507
C166GFP endothelial cell line ATCC Cat# CRL2583 RRID:CVCL_6582

Experimental models: Organisms/strains

C57BL/6J – 24month old Jackson Cat# 000664 RRID:IMSR_JAX:000664
Mck-Tead1 OE mice (Southard et al., 2016)

Oligonucleotides

si-RNA scramble pool Dharmacon Cat# D-001810-10–50
si-Tead1 pool Dharmacon Cat# L-048419-01–0005
si-Zdhhc9 pool Dharmacon Cat# L-058018-01–0005
si-Zfp319 pool Dharmacon Cat# L-059731-01–0005
Apln taqman probe Life Technologies Mm00443562_m1
Hprt taqman probe Life Technologies Mm00446968_m1
Tead1 taqman probe Life Technologies Mm00493507_m1
Barx1 taqman probe Life Technologies Mm01353100_m1
Zic3 taqman probe Life Technologies Mm00494362_m1
Zdhhc9 taqman probe Life Technologies Mm00552609_m1
Gcm2 taqman probe Life Technologies Mm00492312_m1
Pecam1 taqman probe Life Technologies Mm01242576_m1
Icam 1 taqman probe Life Technologies Mm00516023_m1
Tek (Tie2) taqman probe Life Technologies Mm00443243_m1

Recombinant DNA

N/A

Software and algorithms

SnapGene Snapgene N/A
metaXpress Molecular Devices N/A
VS-ASW FL software Nikon N/A
MetaXpress software Molecular Devices N/A
NIS-Elements Nikon N/A
GraphPad Prism Software GraphPad N/A
ApE ApE version 7–9
Transcription factor-DNA interaction detection in yeast (TIDY) (Hens et al., 2011) https://updeplasrv1.epfl.ch/software/
https://doi.org/10.1038/nmeth.1763

Other

Seurat (Butler et al., 2018) version3.1.5
Harmony (Korsunsky et al., 2019) version 1.0