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. Author manuscript; available in PMC: 2023 Jan 1.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2022 Jul 1;31(7):1466–1472. doi: 10.1158/1055-9965.EPI-22-0053

Table 4.

SNPs that are highly correlated (r2 > 0.2) with rs2702185 in northwestern Europeans along with their functional annotations.

SNP Position non-AJ r2 AJ r^2 Functional Region in FUN-LDA Promoter Prob (Weak) Enhancer Prob
rs7517641 183406643 0.68 0.50 183406626 – 183406650 0.000 0.268
rs6678117 183410168 0.30 0.46 183410151 – 183410175 0.000 0.175
rs10737246 183443785 0.75 0.50 183443776 – 183443800 0.874 0.000
rs4652803 183446620 0.75 N.D. 183446601 – 183446625 0.492 0.047
rs2782412 183501661 0.28 0.50 183501651 – 183501675 0.000 0.268
rs17434335 183505044 0.75 0.50 183505026 – 183505050 0.004 0.076
rs34823167 183534681 0.61 0.50 183534676 – 183534700 0.001 0.166
rs80008821 183563520 0.75 0.37 183563501 – 183563525 0.001 0.216
*

Positions are on chromosome 1, build 37.