Table 4.

MLEs of parental zygote frequencies and their standard deviations and the empirical power of double reduction detection estimated from simulated data for a natural panmictic autohexaploid population under different degrees of double reduction and sample sizes

Estimates of Parental Genotype Frequencies
		α = 0			1/7			1/6			1/5			1/4
Genotype True Value		n = 100	200	400	100	200	400	100	200	400	100	200	400	100	200	400
6A	P6 = 0.10	0.102 ± 0.065	0.103 ± 0.051	0.101 ± 0.035	0.1116 ± 0.067	0.116 ± 0.53	0.117 ± 0.040	0.118 ± 0.070	0.116 ± 0.052	0.118 ± 0.038	0.120 ± 0.070	0.121 ± 0.053	0.122 ± 0.041	0.126 ± 0.071	0.126 ± 0.053	0.127 ± 0.044
5A1a	P5 = 0.05	0.046 ± 0.029	0.049 ± 0.023	0.049 ± 0.015	0.049 ± 0.030	0.052 ± 0.022	0.052 ± 0.016	0.052 ± 0.032	0.052 ± 0.022	0.052 ± 0.016	0.052 ± 0.032	0.051 ± 0.022	0.052 ± 0.016	0.052 ± 0.029	0.053 ± 0.023	0.053 ± 0.016
4A2a	P4 = 0.20	0.210 ± 0.124	0.204 ± 0.092	0.199 ± 0.061	0.200 ± 0.114	0.197 ± 0.085	0.192 ± 0.059	0.200 ± 0.114	0.197 ± 0.084	0.192 ± 0.057	0.200 ± 0.115	0.191 ± 0.082	0.190 ± 0.057	0.196 ± 0.106	0.190 ± 0.077	0.186 ± 0.056
3A3a	P3 = 0.25	0.228 ± 0.066	0.233 ± 0.039	0.244 ± 0.024	0.212 ± 0.067	0.218 ± 0.046	0.226 ± 0.032	0.205 ± 0.071	0.218 ± 0.045	0.224 ± 0.033	0.202 ± 0.072	0.216 ± 0.047	0.220 ± 0.037	0.201 ± 0.071	0.209 ± 0.051	0.214 ± 0.041
2A4a	P2 = 0.13	0.151 ± 0.115	0.139 ± 0.072	0.137 ± 0.048	0.141 ± 0.099	0.127 ± 0.063	0.127 ± 0.043	0.136 ± 0.095	0.127 ± 0.060	0.126 ± 0.042	0.133 ± 0.088	0.129 ± 0.059	0.123 ± 0.042	0.125 ± 0.078	0.123 ± 0.057	0.121 ± 0.040
1A5a	P1 = 0.10	0.103 ± 0.064	0.106 ± 0.053	0.105 ± 0.037	0.108 ± 0.069	0.105 ± 0.053	0.103 ± 0.036	0.108 ± 0.071	0.104 ± 0.051	0.103 ± 0.036	0.109 ± 0.071	0.107 ± 0.051	0.103 ± 0.036	0.106 ± 0.065	0.105 ± 0.050	0.103 ± 0.035
6a	P0 = 0.17	0.161 ± 0.082	0.167 ± 0.062	0.165 ± 0.045	0.175 ± 0.079	0.183 ± 0.061	0.183 ± 0.044	0.181 ± 0.089	0.185 ± 0.060	0.185 ± 0.045	0.184 ± 0.080	0.185 ± 0.060	0.189 ± 0.045	0.194 ± 0.079	0.193 ± 0.061	0.196 ± 0.048
Rejecting null hypothesis		0.092	0.086	0.083	0.667	0.713	0.750	0.708	0.717	0.762	0.709	0.727	0.779	0.742	0.785	0.855

The proportion of rejecting the null hypothesis is the power of double reduction detection for the simulated data under α ≠ 0 and the rate of false positive discovery under α = 0.