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. 2022 Jul 4;22:318. doi: 10.1186/s12870-022-03691-w

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© The Author(s) 2022

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 3 — ONT long-sequencing reads alignment at di locus in ‘S10321 Hua 5-15’ and ‘Klara Meyer’ accessions. At the top: reads breakpoint due to a ~5.0 Kb LTR insertion (di¹) located at position +221 (Pp02:25,860,338) from the pri-miR172d transcription initiation site. At the bottom: a ~9.5 Kb deletion (di^Δ) from (Pp02:25,855,441 to 25,864,957), encompassing the entire pri-miR172 precursor sequence including its flanking DNA regions in ‘Klara Meyer’