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. 2022 Jun 16;12:870487. doi: 10.3389/fonc.2022.870487

Table 4.

List of genes and variants cross-validated with PCR-Sanger sequencing and their confirmation status.

Case number Gene Sample type Nucleotide change AA change Mutation detection NGS VAF percentage (%)
Case-11 CREBBP FFPE tDNA C > T C1237Y + 27
Case-14 HIST1H1E Granulocyte C > T P131S 0
Case-14 HIST1H1E FFPE tDNA C > T P131S + 67
Case-14 HIST1H1E cfDNA C > T P131S + 34
Case-14 ARID1A Granulocyte C > T R1722* 0
Case-14 ARID1A FFPE tDNA C > T R1722* + 33
Case-14 ARID1A cfDNA C > T R1722* + 20
Case-11 STAT6 Granulocyte T > A D523V 0
Case-11 STAT6 FFPE tDNA T > A D523V + 45
Case-09 CTSS Granulocyte A > C Y132D 0
Case-09 CTSS FFPE tDNA A > C Y132D + 39
Case-09 HIST1H1E Granulocyte G > C A65P 0
Case-09 HIST1H1E FFPE tDNA G > C A65P + 53
Case-09 ATP6AP1 Granulocyte G > A G363R 0
Case-09 ATP6AP1 FFPE tDNA G > A G363R + 45
Case-11 IRF8 Granulocyte T > C Y23H 0
Case-11 IRF8 FFPE tDNA T > C Y23H + 31
Case-05 KMT2D Granulocyte G > A R2417* 0
Case-05 KMT2D FFPE tDNA G > A R2417* + 33

AA, Amino acid.

NGS, Next-generation sequencing.

VAF, Variant allele fraction.

FFPE tDNA, Formalin-fixed paraffin-embedded tumor tissue DNA.

Granulocyte, Granulocyte gDNA.