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. 2022 May 10;50(W1):W427–W433. doi: 10.1093/nar/gkac322

Table 2.

Example datasets available in ICARUS

Dataset Available from…
2,700 Human peripheral blood mononuclear cells (Seurat guided clustering tutorial dataset) 10x genomics
https://cf.10xgenomics.com/samples/cell/pbmc3k/pbmc3k_filtered_gene_bc_matrices.tar.gz
500 human peripheral blood mononuclear cells 10x genomics
https://cf.10xgenomics.com/samples/cell-exp/6.1.0/500_PBMC_3p_LT_Chromium_Controller/500_PBMC_3p_LT_Chromium_Controller_filtered_feature_bc_matrix.tar.gz
5,000 cells from a combined cortex, hippocampus and subventricular zone of an E18 mouse 10x genomics
https://cf.10xgenomics.com/samples/cell-exp/3.0.2/5k_neuron_v3/5k_neuron_v3_filtered_feature_bc_matrix.tar.gz
8,617 cord blood mononuclear cells (Seurat multimodal data tutorial), this dataset also contains CITE-seq data for 11 surface proteins. NCBI GEO
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc = GSE100866
10k Human PBMCs Multiplexed, 2 CMOs (CellPlex) 10x genomics
https://www.10xgenomics.com/resources/datasets/10-k-human-pbm-cs-multiplexed-2-cm-os-3–1-standard-6–0-0