Table 2.
Common muscle disease module (CMDM) genes.
| Gene symbol | Summary effect size in discovery set | Summary effect size in validation set | Summary effect size in secondary validation set |
|---|---|---|---|
| CHRNA1 | 1.31 | 1.125 | 1.796 |
| LGMN | 1.27 | 1.14 | 1.114 |
| MYH8 | 1.161 | 1.241 | 2.009 |
| C1R | 1.094 | 0.924 | 0.743 |
| AKR1A1 | 1.041 | 0.879 | 2.603 |
| CDKN1A | 1.04 | 1.009 | 1.855 |
| CILP | 0.993 | 1.189 | 1.01 |
| TNFRSF21 | 0.992 | 0.942 | 0.464 |
| OSBPL8 | 0.981 | 0.827 | 1.309 |
| KLHL2 | 0.961 | 0.894 | 2.101 |
| TMEM208 | 0.946 | 0.47 | 0.83 |
| TMEM87A | 0.94 | 0.49 | 0.671 |
| IFITM2 | 0.932 | 0.599 | 0.195 |
| C3 | 0.892 | 1.083 | 0.801 |
| DUSP22 | 0.88 | 0.635 | 0.07 |
| DDOST | 0.855 | 0.308 | 0.321 |
| LETMD1 | 0.847 | 0.844 | 0.563 |
| CETN2 | 0.835 | 0.712 | 0.792 |
| GPX3 | 0.833 | 0.549 | − 0.252 |
| ITPA | 0.821 | 0.468 | 0.865 |
| CLTC | 0.808 | 0.633 | 0.894 |
| SCPEP1 | 0.796 | 0.767 | 0.099 |
| HEXA | 0.789 | 0.54 | − 0.145 |
| SAE1 | 0.787 | 0.549 | 1.234 |
| CHI3L1 | 0.765 | 0.442 | − 0.44 |
| USP3 | 0.76 | 0.386 | 0.619 |
| HSP90B1 | 0.754 | 0.373 | 0.169 |
| CKAP4 | 0.752 | 0.46 | 0.638 |
| FST | 0.747 | 0.923 | 1.546 |
| NIP7 | 0.742 | 0.243 | − 0.076 |
| PANX1 | 0.737 | 0.666 | 0.389 |
| HEY1 | 0.737 | 0.37 | 0.828 |
| TBC1D16 | 0.726 | 0.571 | 0.84 |
| TRMT112 | 0.711 | 0.475 | 0.698 |
| TPP1 | 0.698 | 0.586 | − 0.092 |
| CERS2 | 0.673 | 0.158 | 0.793 |
| ATP2A1 | − 0.696 | − 0.192 | − 1.703 |
| CS | − 0.71 | − 0.673 | 0.185 |
| ALDOA | − 0.719 | − 0.428 | − 1.847 |
| SH2B2 | − 0.721 | − 0.724 | − 0.573 |
| PTP4A1 | − 0.75 | − 0.568 | − 0.259 |
| ACADSB | − 0.751 | − 0.356 | − 0.814 |
| FXYD1 | − 0.754 | − 0.534 | 0.013 |
| ATP5F1D | − 0.762 | − 0.603 | − 0.03 |
| CAPN3 | − 0.774 | − 0.525 | 0.399 |
| DUSP26 | − 0.792 | − 0.661 | − 0.388 |
| SLC25A12 | − 0.834 | − 0.479 | − 0.32 |
| TAPT1 | − 0.865 | − 0.37 | − 0.506 |
| GOT2 | − 0.88 | − 0.612 | − 0.3 |
| PYGM | − 0.956 | − 0.432 | − 1.556 |
| LRRC20 | − 0.968 | − 0.635 | − 0.208 |
| CAMK2G | − 0.996 | − 0.652 | − 0.445 |
Genes are listed from the largest absolute meta-effect size to the smallest (from summary effect size in discovery set).