TABLE 2:
Top enriched Gene Ontology biological processes terms in gene clusters.
| Go term | FDR | Go term | FDR |
|---|---|---|---|
|
| |||
| Cluster 1 (913 genes) | Cluster 2 (567 genes) | ||
|
| |||
| Oxidative phosphorylation | 6.5E-23 | G-protein coupled receptor activity | 6.8E-10 |
| NIK/NF-kappaB signaling | 2.5E-7 | Cytokine-cytokine receptor interaction | 8.4E-3 |
| Wnt signaling pathway | 6.6E-5 | Natural killer cell activation involved in immune response | 1.4E-3 |
|
| |||
| Cluster 3 (427 genes) | Cluster 4 (403 genes) | ||
|
| |||
| Focal adhesion | 2.6E-16 | T cell receptor signaling pathway | 2.1E-12 |
| calcium ion binding | 3.1E-14 | Cell adhesion molecules (CAMs) | 2.2E-11 |
| ECM-receptor interaction | 4.1E-12 | Antigen processing and presentation | 8.2E-11 |
| PI3K-Akt signaling pathway | 2.9E-10 | Jak-STAT signaling pathway | 6.5E-3 |
|
| |||
| Cluster 7 (268 genes) | Cluster 10 (132 genes) | ||
|
| |||
| Cell cycle | 1.3E-60 | Translational initiation | 4.4E-70 |
| cell division | 4.1E-40 | SRP-dependent cotranslational protein targeting to membrane | 5.0E-69 |
| DNA repair | 5.9E-9 | viral transcription | 1.3E-66 |
|
| |||
| Cluster 13 (69 genes) | Cluster 27 (17 genes) | ||
|
| |||
| Defense response to virus | 9.6E-32 | Histone core | 2.9E-33 |
| Immunity | 1.4E-32 | Extracellular exosome | 6.5E-7 |
|
| |||
| Cluster 29 (12 genes) | Cluster 30 (12 genes) | ||
|
| |||
| Antigen binding | 1.6E-10 | Cell adhesion | 1.4E-2 |