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. 2022 May 27;19(6):975–985. doi: 10.7150/ijms.71840

Table 1.

CircRNAs database

Name Link Description Literature
CircAtlas http://circatlas.biols.ac.cn/ Information on circRNA sequences from normal human and many other animal tissues 54
TransCirc https://www.biosino.org/transcirc/ Greatly expands the information on the evidence for predicting circRNA-encoded proteins, allowing prediction of the potential of specific circRNA-encoded proteins and inference of their translation products 55
riboCIRC http://www.ribocirc.com/index.html Predicts the translational potential of circRNAs by pairing Ribo-seq/RNA-seq 56
circRNADb http://reprod.njmu.edu.cn/circRNAdb Database of circRNAs that can encode proteins 57
circBase http://cirbase.org/ Includes information on all identified circRNAs from 6 species, including human and mouse 58
Circbank http://www.circbank.cn Comprehensive database of human circRNAs 59
CircPro http://bis.zju.edu.cn/CircPro Identifies circRNAs with translation potential 60
CircCode https://github.com/PSSUN/CircCode Identifies circRNAs with protein-coding potential with high accuracy 61
Circad http://clingen.igib.res.in/circad/ Provides disease-associated circRNAs 62
CircInteractome https://circinteractome.nia.nih.gov/ Predicts binding of circRNAs to RBP or miRNA 63
TSCD http://gb.whu.edu.cn/TSCD/ Tissue-specific circRNAs in humans and mice 64
MiOncoCirc https://mioncocirc.github.io/ A clinical tumor sample-based circRNA database 64
circRNADisease http://cgga.org.cn:9091/circRNADisease/ Provides information on the association between circRNAs and diseases 65
CSCD2 http://geneyun.net/CSCD2/# A large collection of human cancer-related transcriptome sequencing data to predict potential miRNA-circRNA and RBP-circRNA interactions 66
CircNet 2.0 https://awi.cuhk.edu.cn/~CircNet Integrates 2,732 samples from 37 cancers and the circRNA-miRNA-gene ceRNA regulatory network 67
VirusCircBase http://www.computationalbiology.cn/ViruscircBase/home.html circRNAs in RNA viruses 68