Table 3. Other rRNA E-loop motifs that were not identified by the RNAMotif descriptor.
Molecule | 5′-Side motif | 3′-Side motif | Core motif sequence | Exception to RNAMotif descriptor |
---|---|---|---|---|
The coordinates and the sequences of these E-loop motifs are shown above. Each of these had an exception to the descriptor (shown in the last column). | ||||
E.coli 16S rRNA | 447–9 | 484–7 | GAG:GUUA | Non-canonical motif sequence |
E.coli 23S rRNA | 818–20 | 1186–9 | GAA:GGUA | 5′→3′ distance too long to match current descriptor, non-canonical motif sequence |
858–61 | 916–8 | GGUA:GAA | Non-canonical motif sequence | |
1265–8 | 2012–4 | AGUA:GAA | 5′→3′ distance too long to match current descriptor |