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. 2022 Jul 6;20:303. doi: 10.1186/s12967-022-03503-7

Table 4.

Correlation analysis between eIF6 and relate genes and markers of adaptive immunity cells in ESCA

Description Genemarkers TIMER (n = 184) GEPIA2 (n = 181)
Purity None
Cor p Cor p Cor p
CD8 + Tcell CD8A  − 0.136 0.067  − 0.144 0.050  − 0.130 0.086
CD8B  − 0.070 0.347  − 0.087 0.241  − 0.110 0.140
T cell CD3D  − 0.108 0.147  − 0.114 0.121  − 0.170 *
(general) CD3E  − 0.143 0.055  − 0.155 *  − 0.200 *
CD2  − 0.167 *  − 0.178 *  − 0.190 *
Bcell CD19  − 0.009 0.906  − 0.026 0.728  − 0.120 0.120
CD20 (MS4A1)  − 0.051 0.496  − 0.070 0.345  − 0.100 0.160
CD138 (SDC1)  − 0.084 0.262  − 0.054 0.466  − 0.044 0.550
CD23 (FCER2)  − 0.004 0.960  − 0.019 0.792  − 0.110 0.130
Th1 T-bet (TBX21)  − 0.162 *  − 0.172 *  − 0.190 *
STAT4  − 0.242 *  − 0.242 *  − 0.200 *
STAT1  − 0.097 0.195  − 0.089 0.229 0.003 0.960
IFN-γ (IFNG)  − 0.094 0.207  − 0.090 0.222  − 0.150 *
TNF-α (TNF)  − 0.029 0.695  − 0.008 0.913  − 0.028 0.710
Th2 GATA3  − 0.124 0.097  − 0.117 0.113  − 0.092 0.220
STAT6  − 0.038 0.612  − 0.037 0.616 0.057 0.440
STAT5A  − 0.072 0.334  − 0.081 0.276  − 0.063 0.390
IL13  − 0.116 0.119  − 0.112 0.130  − 0.140 0.061
Tfh BCL6  − 0.382 *  − 0.348 *  − 0.270 *
IL21  − 0.112 0.132  − 0.106 0.152  − 0.180 *
CD278 (ICOS)  − 0.225 *  − 0.215 *  − 0.190 *
CXCL13  − 0.169 *  − 0.174 *  − 0.170 *
Th17 STAT3  − 0.085 0.257  − 0.073 0.321  − 0.042 0.570
IL17A 0.226 * 0.205 * 0.053 0.480
Treg FOXP3  − 0.245 *  − 0.239 *  − 0.210 *
CCR8  − 0.260 *  − 0.266 *  − 0.230 *
STAT5B  − 0.166 *  − 0.160 *  − 0.084 0.260
TGFβ (TGFB1)  − 0.122 0.103  − 0.091 0.217  − 0.076 0.310
CD25 (IL2RA)  − 0.255 *  − 0.248 *  − 0.180 *

T cell

exhaustion

PD-1 (PDCD1)  − 0.116 0.121  − 0.120 0.104  − 0.130 0.078
CTLA4  − 0.205 *  − 0.205 *  − 0.200 *
LAG3  − 0.158 *  − 0.157 *  − 0.085 0.250
TIM-3 (HAVCR2)  − 0.250 *  − 0.236 *  − 0.230 *
GZMB  − 0.108 0.149  − 0.108 0.144  − 0.099 0.180

TAM, tumor associated macrophage; Cor, R value of Spearman’s correlation. Purity, correlation adjusted by purity. *P < 0.05. None, correlation without adjustment