Table 7.
Taxonomic transcript annotations using DIAMOND-NCBI(NR) and Kraken2.
| A (91,171) | B (96,865) | C (76,784) | D (80,456) | |||||
|---|---|---|---|---|---|---|---|---|
| NCBI Nr Taxonomic category | Transcripts | % | Transcripts | % | Transcripts | % | Transcripts | % |
| Fabaceae | 62,368 | 68.41 | 63,097 | 65.14 | 57,558 | 74.96 | 57,878 | 71.94 |
| Other Plants | 2905 | 3.19 | 3036 | 3.13 | 2324 | 3.03 | 2566 | 3.19 |
| Fungi | 4 | 0 | 3140 | 3.24 | 661 | 0.86 | 664 | 0.83 |
| Bacteria | 28 | 0.03 | 38 | 0.04 | 24 | 0.03 | 82 | 0.1 |
| Viruses | 15 | 0.02 | 14 | 0.01 | 4 | 0.01 | 8 | 0.01 |
| Other Eukaryotes | 16 | 0.02 | 333 | 0.34 | 199 | 0.26 | 0 | 0 |
| Total: | 65,336 | 71.66 | 69,658 | 71.91 | 60,770 | 79.14 | 61,198 | 76.06 |
| Kraken2 classification | transcripts | % | transcripts | % | transcripts | % | transcripts | % |
| Plant | 72,016 | 78.99 | 72,771 | 75.13 | 62,359 | 81.21 | 63,673 | 79.14 |
| Bacteria | 387 | 0.42 | 493 | 0.51 | 340 | 0.44 | 344 | 0.43 |
| Fungi | 78 | 0.09 | 1467 | 1.51 | 345 | 0.45 | 293 | 0.36 |
| Total: | 72,481 | 79.5 | 74,731 | 77.15 | 63,044 | 82.11 | 64,310 | 79.93 |