Table 8.

Number of transcript and protein sequences annotated in each rooibos transcriptome.

	A	B	C	D
Total transcripts (>300 bp)	91,171	96,865	76,784	80,456
Transcripts > 300 bp annotated using NCBI(NR)	65,336	69,658	60,770	61,198
Total transcripts (>1000 bp)	48,024	47,447	40,958	40,958
Transcripts > 1000 bp annotated using KEGG	21,040	21,126	19,210	18,646
Total protein sequences	85,234	91,301	75,426	79,234
Proteins annotated using eggNOG: eggNOG annotations	52,688	56,090	50,413	50,338
Proteins annotated using eggNOG: KO annotations	26,011	28,187	25,244	24,894
Proteins annotated using Pfam-A	44,390	46,868	42,244	42,258