Table 1. Information on the sequenced B. mallei genomes included in this analysis.
ID* | Aliases | Collection year | Country of isolation | Host | NCBI Short Read Archive (SRA) Accession IDs |
---|---|---|---|---|---|
L3_0543* | strain 32 | 1972 | unknown | unknown | SAMN19373946 |
L3_0552 | Not attributed | unknown | unknown | unknown | SAMN19373947 |
L3_0554 | Not attributed | unknown | unknown | unknown | SAMN19373948 |
L3_0558 | ATCC 23344T | 1944 | China | human | SAMN19373949 |
L3_0572 | Not attributed | unknown | unknown | unknown | SAMN19373950 |
L3_0580* | Mukteswar | 1996 | India | horse | SAMN19373951 |
L3_0586* | Zagreb | 1996 | Yugoslavia | unknown | SAMN19373952 |
L3_0762 | NCTC 3709; 106 | 1932 | India | horse | SAMN19373953 |
L3_0764 | NCTC_120 (Lister strain), strain A | 1920 | United Kingdom | unknown | SAMN19373954 |
L3_0765 | NCTC 10260, strain 11 | 1949 | Turkey | unknown | SAMN19373955 |
L3_0766 | NCTC 10247, strain 12 | 1960 | Turkey | unknown | SAMN19373956 |
L3_0767 | NCTC 10245, China5, ATCC 10399 | 1972 | China | horse | SAMN19373957 |
L3_0768 | ATCC 15310, NCTC 10230, IVAN | 1961 | Hungary | horse | SAMN19373958 |
L3_2399* | UAE 7, 6SK2, Al Ain Dubai, ANEEF | 2004 | United Arab Emirates | horse (Aneef) | SAMN19373959 |
L3_2955* | Dubai 3, No.6 SK3 v. D2115/04 | 2004 | United Arab Emirates | horse (Aneef) | SAMN19373960 |
L3_2956* | Dubai 4, No.9 SK1 v. D2115/04 | 2004 | United Arab Emirates | horse (Aneef) | SAMN19373961 |
L3_2958* | Dubai 6, No.1 v. D2220/04, Guinea pig | 2004 | United Arab Emirates | horse (Aneef) | SAMN19373962 |
L3_2959* | Dubai 7, No.2 v. D2220/04, Guinea pig | 2004 | United Arab Emirates | horse (Aneef) | SAMN19373963 |
L3_2960* | Dubai 8, No.1 v. D2267/04 | 2004 | United Arab Emirates | horse (Aneef) | SAMN19373964 |
L3_2962* | Dubai 10, No.1 v. D2268.1/04 | 2004 | United Arab Emirates | horse (Aneef) | SAMN19373965 |
L3_2966* | Dubai 14, No.1 v. D2567/04 | 2004 | United Arab Emirates | horse | SAMN19373966 |
L3_2967* | Dubai 15, No.2 v. D2567/04 | 2004 | United Arab Emirates | horse | SAMN19373967 |
L3_2968* | Dubai 16, No.1 v. D2700/04, Guinea pig | 2004 | United Arab Emirates | horse | SAMN19373968 |
L3_2969* | Dubai 17, No.2 v. D2700/04, Guinea pig | 2004 | United Arab Emirates | horse | SAMN19373969 |
L3_3269* | SK3 v. D1113.4/10 | 2010 | Bahrain | horse | SAMN19373970 |
L3_3270* | SK 9 v. D1112.8/10 | 2010 | Bahrain | horse | SAMN19373971 |
L3_3271 | SK2 v. D1282/10 (nostril) | 2010 | Bahrain | dromedary | SAMN19373972 |
L3_3272* | SK v. D1257.3/10 | 2010 | Bahrain | horse | SAMN19373973 |
L3_3273 | SK2 v. D1282/10 (blood) | 2010 | Bahrain | dromedary | SAMN19373974 |
L3_3314* | Dubai 2, No.6 SK2 v. D2115/04 | 2004 | United Arab Emirates | horse (Aneef) | SAMN19373975 |
L3_3315* | Dubai 1, No.5 SK2 v. D2115/04 | 2004 | United Arab Emirates | horse (Aneef) | SAMN19373976 |
L3_3316* | D2231/10 | 2010 | Bahrain | horse | SAMN19373977 |
L3_3317* | D274/11 | 2011 | Bahrain | horse | SAMN19373978 |
L3_3318* | D400/11 | 2011 | Bahrain | horse | SAMN19373979 |
L3_3319* | D401/11 | 2011 | Bahrain | horse | SAMN19373980 |
L3_3320* | D403/11 | 2011 | Bahrain | horse | SAMN19373981 |
A104-4 | Zagreb | unassigned | Yugoslavia | horse | SAMN21877244 |
* MLVA/SNP: Scholz, Pearson (14); L3: Culture Collection German Federal Armed Forces, A: Culture Collection Robert Koch Institute