Table 3. Summary of findings: Sensitivity and specificity.
Test | Intended location | Diagnostic target—as reported in studies | Sample type | Enrich-ment step? | Reference | No. Studies | Study IDs | Sensitivity % (95% CI) | Specificity % (95% CI) |
---|---|---|---|---|---|---|---|---|---|
Immunologically-based tests detecting lipopolysaccharides or proteins | |||||||||
Artron RDT | Field | Antigens of V. cholerae O1 and O139 | Stool | No | Culture | 1 | Matias 2017 [45] | 98.6 (92.7–100) | 69.1 (55.2–80.9) |
Bead ELISA | Laboratory | Cholera toxin | Stool | No | Culture | 3 | Range of point estimates | 69.9–84.7 | 63.6–81.8 |
Ramamurthy 1996 [55] (mAb-based) | 69.9 (57.9–79.8)1 | 81.8 (59–94)1 | |||||||
Ramamurthy 1996 [55] (pAb-based) | 82.1 (71.1–89.8)1 | 63.6 (40.8–82)1 | |||||||
Ramamurthy 1993 [54] | 82.9 (71.6–90.5)1 | 79.2 (65.5–88.7)1 | |||||||
Ramamurthy 1992 [53] | 84.7 (72.5–92.5)1 | 81.3 (53.7–95)1 | |||||||
BengalScreen | Field | Lipopolysaccharide antigen of V. cholerae O139 | Stool | No | Culture | 1 | Hasan 1995 [37] | 95 (71.9–99.7)1 | 100 (75.9–100)1 |
Bengal DFA | Field | Lipopolysaccharide antigen of V. cholerae O139 | Stool | No | Culture | 1 | Hasan 1995 [37] | 100 (79.1–100)1 | 100 (75.9–100)1 |
Bengal SMART | Field | ’A’ factor of V. cholerae O139 | Stool | No | Culture | 1 | Qadri 1995 [52] | 97 (89.5–99.1)1 | 100 (95.5–100)1 |
Cholera Screen | Field | ’A’ factor of V. cholerae lipopolysaccharide O1 | Stool | No | Culture | 3 | Range of point estimates | 98–100 | 22.2–100 |
Colwell 1992 [29] (Guatemala) | 100 (65.5–100)1 | 42.9 (11.8–79.8)1 | |||||||
Colwell 1992 [29] (Bangladesh) | 98 (88–99.9)1 | 77.8 (57.3–90.6)1 | |||||||
Carillo 1994 [25] | 98.8 (92.4–99.9)1 | 22.2 (7.4–48.1)1 | |||||||
Islam 1994 [39] | 100 (39.58–100)1 | 100 (91.58–100)1 | |||||||
Cholkit | Field | Lipopolysaccharide antigen of V. cholerae O1 | Stool | No | Culture | 2 | Range of point estimates | 79.4–97.7 | 87.4–96.5 |
Islam 2019 [40] | 79.4 (62.1–91.3) | 87.4 (85.5–89.1) | |||||||
Sayeed 2018 [56] | 97.7 (88.4–99.9)2 | 96.5 (88.6–99.6)2 | |||||||
Lipopolysaccharide antigen of V. cholerae O1 | Stool | Yes | Culture | 1 | Islam 2019 [40] | 66.7 (47.2–82.7) | 94.4 (91.7–96.5) | ||
Co-agglutination test (COAT) | Field | Lipopolysaccharide antigens of V. cholerae O139 | Stool | No | Culture | 1 | Qadri 1994 [51] | 92 (84.1–96.5)1 | 100 (96.7–100)1 |
Cholera DFA | Laboratory | ’A’ factor of V. cholerae lipopolysaccharide O1 | Stool | No | Culture | 1 | Hasan 1994a [35] | 100 (82.2–100)1 | 100 (80.8–100)1 |
Cholera diagnostic kit (mAb-based dot-blot ELISA) | Field | V cholerae O1 antigen A | Stool | Yes | Culture | 1 | Range of point estimates | 95.2–100 | 100 |
Supawat 1994 [57] (patients) | 100 (73.2–100)1 | 100 (97.6–100)1 | |||||||
Supawat 1994 [57] (household contacts) | 95.2 (74.1–99.8)1 | 100 (98.8–100)1 | |||||||
Cholera SMART | Field | Antigen A of V. cholerae O1 lipopolysaccharide | Stool | No | Culture | 3 | Range of point estimates | 58–100 | 95–100 |
Bolaños 2004 [23] | 100 (74.7–100)1 | 100 (71.7–100)1 | |||||||
Hasan 1994b [36] (Bangladesh) | 95.6 (76–99.8)1 | 100 (80.8–100)1 | |||||||
Kalluri 2006 [42] (field techs) | 58 (46–71) | 95 (91–98) | |||||||
Kalluri 2006 [42] (lab techs) | 83 (75–90) | 88 (82–93) | |||||||
Antigen A of V. cholerae O1 lipopolysaccharide | Stool | No | Cholera Screen | 1 | Hasan 1994b [36] (Mexico) | 100 (90.2–100)1 | 100 (92.8–100)1 | ||
Crystal VC | Field | Lipopolysaccharide antigen of V. cholerae O1 and O139 | Stool | No | Bacterial Culture | 7 | Range of point estimates | 65.6–98.6 | 49.2–98.4 |
George 2014 [32] | 65.6 (52.7–77.1) | 91.8 (81.9–97.3) | |||||||
Page 2012 [50] (clinicians) | 93.8 (89.2–97.2)2 | 78.4 (59.6–98.7)2 | |||||||
Page 2012 [50] (lab techs) | 93.0 (88.3–96.6)1 | 85.2 (69.8–99.2)1 | |||||||
Ley 2012 [43] | 93.1 (88.7–96.2)2 | 49.2 (44.3–54.1)2 | |||||||
Mukherjee 2010 [47] | 91.70 (95% CI not available) | 72.90 (95% CI not available) | |||||||
Islam 2019 [40] | 72.2 (64.6–78.9) | 77.1 (75.9–78.2) | |||||||
Sayeed 2018 [56] | 97.5 (87.5–99.9)2 | 98.4 (92.0–99.9)2 | |||||||
Matias 2017 [45] | 98.6 (96.5–99.6) | 71.1 (64.6–76.9) | |||||||
Lipopolysaccharide antigen of V. cholerae O1 and O139 | Stool | Yes | Bacterial Culture | 3 | Range of point estimates | 75–98.9 | 90–98.4 | ||
George 2014 [32] | 75 (62.6–85) | 98.4 (91.2–100) | |||||||
Bwire 2017 [24] | 98.9 (94.09–99.97) | 90 (55.5–99.75) | |||||||
Islam 2019 [40] | 68.3 (51.9–81.9); | 90.8 (88.1–92.9) | |||||||
Lipopolysaccharide antigen of V. cholerae O1 and O139 | Stool | No | PCR | 2 | Range of point estimates | 94.4–97 | 75–79.7 | ||
Ontweka 2016 [10] | 94.4 (81.3–99.3) | 79.7 (67.8–88.7) | |||||||
Harris 2009 [34] | 97 (88.7–99.5)1 | 75 (56.2–87.9)1 | |||||||
Lipopolysaccharide antigen of V. cholerae O1 and O139 | Stool | Yes | PCR | 2 | Range of point estimates | 86.1–89.3 | 98.9–100 | ||
Ontweka 2016 [10] | 86.1 (70.5–95.3) | 100 (94.4–100) | |||||||
Debes 2016 [30] | 89.3 (71.8–97.7)1 | 98.9 (97.8–99.6)1 | |||||||
Lipopolysaccharide antigen of V. cholerae O1 and O139 | Stool | No | Culture or PCR | 1 | Range of point estimates | 88.2–91.9 | 82.6–88.6 | ||
Page 2012 [50] (clinicians) | 91.9 (87–95.4) | 82.6 (71.6–90.7) | |||||||
Page 2012 [50] (lab techs) | 88.2 (82.6–92.4) | 88.6 (78.7–94.9) | |||||||
Lipopolysaccharide antigen of V. cholerae O1 and O139 | Water | Yes | Culture | 2 | Range of point estimates | 65.6–87 | 99.6–100 | ||
Rashid 2017 [1] | 65.6 (55.2–75) | 99.6 (99.2–99.9) | |||||||
Chakraborty 2013 [28] | 87 (74.9–94.3)1 | 100 (99–100) 1 | |||||||
Dot-blot ELISA | Laboratory | V. cholerae O1 antigen | Stool | No | Culture | 1 | Chaicumpa 1995 [26] | 63 (53.1–71.3)1 | 97 (82–99.8)1 |
V. cholerae O139 antigen | Stool | Yes | Culture | 1 | Chaicumpa 1998 [27] | 100 (89.6–100)1 | 99.95 (99.8–99.9)1 | ||
IP dipstick | Field | V. cholerae O1 lipopolysaccharide | Stool | No | Culture | 3 | Range of point estimates | 93–98.5 | 67–95.9 |
Wang 2006 [59] | 93 (87–99) | 77 (69–85) | |||||||
Kalluri 2006 [42] (field techs); | 93 (87–97) | 67 (60–74) | |||||||
Kalluri 2006 [42] (lab techs) | 94 (88–98) | 76 (70–82) | |||||||
Nato 2003 [49] (Madagascar) | 98.5 (90.7–99.9)1 | 95.9 (87.8–98.9)1 | |||||||
Nato 2003 [49] (Bangladesh) | 94.2 (83.1–98.5)1 | 84.0 (70.3–92.4)1 | |||||||
V. cholerae O1 lipopolysaccharide | Stool | Yes | Culture | 2 | Range of point estimates | 97–97 | 92.4–97 | ||
Wang 2006 [59] | 97 (93–100) | 97 (95–100) | |||||||
Bhuiyan 2003 [22] | 97 (88.7–99.5)1 | 92.4 (82.5–97.2)1 | |||||||
V. cholerae O139 lipopolysaccharides | Stool | No | Culture | 1 | Nato 2003 [49] (Bangladesh) | 100 (95–100) 1 | 92.5 (82.7–97.2)1 | ||
V. cholerae O139 lipopolysaccharides | Stool | Yes | Culture | 1 | Bhuiyan 2003 [22] | 92.6 (74.2–98.7)1 | 98.1 (92.8–99.7)1 | ||
Latex agglutination test | Field | Lipopolysaccharide antigen of V. cholerae O1 and O139 | Stool | No | Culture | 1 | Carillo 1994 [25] | 100 (94.4–100)1 | 33 (14.4–58.8)1 |
Medicos dipstick | Field | V cholerae O1 (exact target and mechanism unknown)3 | Stool | No | Culture | 1 | Range of point estimates | 84–88 | 79–80 |
Kalluri 2006 [42] (field techs) | 84 (77–91) | 79 (73–85) | |||||||
Kalluri 2006 [42] (lab techs) | 88 (81–94) | 80 (73–95) | |||||||
Pathogen Detection Kit (PDK) | Field | Antigen A of V. cholerae O1 lipopolysaccharide | Stool | No | Culture | 1 | Bolaños 2004 [23] | 100 (71.7–100) | 86 (56.2–97.5) |
SD Bioline | Field | Antigens of V. cholerae O1 and O139 | Stool | No | Culture or PCR | 1 | Mwaba 2018 [48] | 90.9 (81.3–96.6) | 95.2 (89.1–98.4) |
Antigens of V. cholerae O1 and O139 | Stool | Yes | Culture or PCR | 1 | Mwaba 2018 [48] | 95.5 (87.3–99.1) | 100 (96.5–100) | ||
Antigens of V. cholerae O1 and O139 | Stool | No | Culture | 1 | Matias 2017 [45] | 81.1 (75.6–85.8) | 92.8 (88.4–95.9) | ||
Two-tip dipstick ELISA (sandwich ELISA) | Field | V. cholerae O1 and O139 antigens | Stool | Yes | Culture | 1 | Tuteja 2007 [58] | 100 (91.4–100)1 | 100 (82.2–100)1 |
V. cholerae O1 and O139 antigens | Water | Yes | Culture | 1 | Tuteja 2007 [58] | 100 (31–100) 1 | 100 (90.6–100)1 | ||
Vch-UPT-LF | Field | V. cholerae O1 antigen | Water | No | Combination (culture or 2+ of colloidal gold assay, real time fluorescent PCR, Vch-UPT-LF) | 1 | Hao 2017 [33] | 100 (71.7–100) | 100 (94.5–100) |
Vibrio cholerae O139 antigen | Water | No | As above | 1 | Hao 2017 [33] | 100 (19.8–100) | 99 (93.4–99.9) | ||
PCR-based tests detecting genes or nucleic acids | |||||||||
Multiplex PCR (with: O139-rfb primers—O139F-2, O139R-2; O1-rfb primers—O1F-2, O1R-2; cholera toxin primers—VCT1, VCT2) | Laboratory | V. cholerae O1 and O139 rbf-specific genes and the ctxA gene. | Stool | No | Culture | 1 | Sayeed 2018 [56] | 73.6 (58.5–85.7)2 | 97.2 (93.2–99.2) 2 |
V. cholerae O1 and O139 rbf-specific genes and the ctxA gene. | Stool | Yes | Culture | 1 | Hoshino 1998 [38] | 100 (88.6–100)1 | 95 (87.5–98.4)1 | ||
PCR (with primers specific to espM gene) | Laboratory | epsM gene of V. cholerae | Water | Yes | Culture | 1 | Momtaz 2013 [46] | 100 (31–100) 1 | 100 (98.9–100)1 |
PCR (with primers specific to V. cholerae O1) | Laboratory | Cholera Toxin gene of V. cholerae O1. | Stool | Yes | Culture | 1 | Ramamurthy 1993 [54] | 100 (93.5–100)1 | 55 (40.6–68.2)1 |
PCR assay (with new primers O139-1 and O139-2) | Laboratory | Chromosomal region of V. cholerae O139 | Stool | No | Culture | 1 | Albert 1997 [21] | 94 (84.7–98.1)1 | 100 (95.9–100)1 |
TaqMan Array Card (singleplex real time PCR format) | Laboratory | toxR gene | Stool | No | Conventional assay | 1 | Liu 2013 [44] | 100 (59.8–100)1 | 100 (93.7–100)1 |
toxR gene | Stool | No | PCR Luminex | 1 | Liu 2013 [44] | 100 (62.9–100)1 | 100 (95.4–100)1 | ||
Other test types: real-time cell analysis, and selective media-based tests | |||||||||
Cholera toxin real-time cell analysis | Laboratory | Cholera toxin | Stool | No | Combination (2+ matching results among real-time PCR, VET-RPLA, and CT-RTCA) | 1 | Jin 2013 [41] | 90 (72.3–97.4)1 | 97 (89.1–99.5)1 |
ChromID Vibrio | Laboratory | V. cholerae bacterial strains | Stool | No | Combination (by Vitek 2 and/or ID 32 E biochemical strips, PCR, or comparison of ChromID Vibrio with TCBS) | 1 | Eddabra 2011 [31] | 79 (48.8–94.3) 1 | 100 (75.9–100) 1 |
V. cholerae bacterial strains | Stool | Yes | As above | 1 | Eddabra 2011 [31] | 100 (73.2–100)1 | 100 (75.9–100)1 | ||
TCBS | Laboratory | V. cholerae bacterial strains | Stool | No | As above | 1 | Eddabra 2011 [31] | 79 (48.8–94.3)1 | 50 (25.5–74.5)1 |
V. cholerae bacterial strains | Stool | Yes | As above | 1 | Eddabra 2011 [31] | 100 (73.2–100)1 | 50 (25.5–74.5)1 |
1Confidence Intervals calculated from raw numbers provided in paper
2Estimate calculated using Bayesian latent class modelling
3Exact target and mechanism unknown, assumed immunologically-based