Fig. A.7.

This figure depicts the nDCG scores for all of the DREAM4 and DREAM5 networks for both GENIE3 and iRF-LOOP as the number of edges scored, k, increases. The maximum k for each network depends on the number of true positive values in the corresponding gold standard network, ranging from 176 to 249 edges for the DREAM4 networks and 2,066 to 4,012 edges for the DREAM5 networks. For all networks except the DREAM5 Network 4, the AUnDCG for iRF-LOOP is higher than the AUnDCG for GENIE3, this suggests that iRF-LOOP outperforms GENIE3.