Table 1.
Co-occurrence on DXS, DXR, GPPS, G10H, or 10HGO family.
No. of queries matched | Plant organism | Gene co-occurrence | ||||
---|---|---|---|---|---|---|
DXS | DXR | 10HGO | G10H | GPPS | ||
5 | Aquilegia coerulea, Citrus clementine, Citrus sinensis Erythranthe guttata, Eucalyptus grandis, Gossypium raimondii, Malus domestica, Morus notabilis, Nelumbo nucifera, Nicotiana sylvestris, Nicotiana tomentosiformis, Populus trichocarpa, Prunus mume, Prunus persica, Pyrus × bretschneideri, Ricinus communis, Solanum lycopersicum, Theobroma cacao, Vitis vinifera | ✓ | ✓ | ✓ | ✓ | ✓ |
4 | Cicer arietinum, Cucumis sativus, Fragaria vesca, Glycine max, Linum usitatissimum, Manihot esculenta, Phaseolus vulgaris | ✓ | ✓ | ✓ | ✓ | |
Beta vulgaris | ✓ | ✓ | ✓ | ✓ | ||
Solanum tuberosum | ✓ | ✓ | ✓ | ✓ | ||
3 | Aegilops tauschii, Amborella trichopoda, Arabidopsis lyrata, Arabidopsis thaliana, Boechera stricta, Brachypodium distachyon, Brassica oleracea, Brassica rapa, Camelina sativa, Capsella grandiflora, Capsella rubella, Carica papaya, Cucumis melo, Eutrema salsugineum, Hordeum vulgare, Leersia perrieri, Musa acuminata, Oryza barthii, Oryza brachyantha, Oryza glaberrima, Oryza glumipatula, Oryza nivara, Oryza punctata, Oryza rufipogon, Oryza sativa, Panicum virgatum, Phoenix dactylifera, Physcomitrella patens, Selaginella moellendorffii, Setaria italic, Sorghum bicolor, Tarenaya hassleriana, Zea mays | ✓ | ✓ | ✓ | ||
Medicago truncatula | ✓ | ✓ | ✓ | |||
2 | Arabis alpina | ✓ | ✓ | |||
Triticum aestivum | ✓ | ✓ | ||||
1 | Chlorella variabilis, Coccomyxa subellipsoidea, Triticum urartu, Volvox carteri | ✓ | ||||
Micromonas pusilla, Oryza meridionalis, Ostreococcus lucimarinus, Ostreococcus tauri | ✓ | |||||
Rate of gene co-occurrence (%) | 87.5 | 94.4 | 38.9 | 30.6 | 90.3 |
The symbol ✓ indicates the presence of relative homologous gene for DXS, DXR, 10HGO, G10H, or GPPS of R. glutinosa.