| CELLO
subcellular localization
predictor |
http://cello.life.nctu.edu.tw/ |
subcellular localization
prediction |
| DAVID bioinformatics tool |
http://david.abcc.ncifcrf.gov |
functional annotation
tool |
| STRING
database |
http://string-db.org/ |
for known and predicted
protein/COGs interaction |
| NCBI |
http://blast.ncbi.nlm.nih.gov/ |
biomedical and
genomic information
source |
| KEGG database |
http://www.genome.jp/ |
pathway analysis and comparison |
| Cytoscape version
3.6.0 |
http://www.cytoscape.org/ |
for network analysis and
visualization |
| FunRich tool 3.1.3 |
http://funrichweb.org/ |
for significant association
of DEGs in biological pathways |
| CIMminer |
https://discover.nci.nih.gov |
for cluster analysis
regarding
their expression value |
| ActiveDriverDB |
https://www.activedriverdb.org/ |
for mutation analysis |
| WikiPathways |
https://www.wikipathways.org/ |
pathway analysis
and comparison |
| oPOSSUM version 3.0 |
http://opossum.cisreg.ca/oPOSSUM3/ |
prediction of regulatory
motifs |
| miRDB |
http://mirdb.org./ |
to explore the functional
annotation |
