TABLE 2.
Primer | Sequence (5′ to 3′) | Use | Specificity or target | Reference |
---|---|---|---|---|
Bif164-f | GGGTGGTAATGCCGGATG | PCR | Bifidobacterium 16S | 17, 19 |
Bif662-r | CCACCGTTACACCGGGAA | PCR | Bifidobacterium 16S | 17, 19 |
Bif164-GC-f | CGCCCGGGGCGCGCCCCGGGCGGGGCGGGGGCACGGGGGG-GGGTGGTAATGCCGGATG | PCR | Bifidobacterium 16S | This study |
Bif662-GC-r | CGCCCGCCGCGCGCGGCGGGCGGGGCGGGGGCACGGGGGG-CCACCGTTACACCGGGAA | PCR | Bifidobacterium 16S | This study |
Im26-f | GATTCTGGCTCAGGATGAACG | PCR | Bifidobacterium 16S | 15 |
Im3-r | CGGGTGCTICCCACTTTCATG | PCR | Bifidobacterium 16S | 15 |
7-f | AGAGTTTGAT(C/T)(A/C)TGGCTCAG | PCR | Eubacterial 16S | 18 |
1510-r | ACGG(C/T)TACCTTGTTACGACTT | PCR | Eubacterial 16S | 18 |
1401-r | CGGTGTGTACAAGACCC | RT-PCR | Eubacterial 16S | 30 |
338-r | CTGCTGCCTCCCGTAGGAGT | Sequencing | Eubacterial 16S | 18 |
338-f | CTCCTACGGGAGGCAGCAG | Sequencing | Eubacterial 16S | 18 |
515-r | ATCGTATTACCGCGGCTGCTGGCAC | Sequencing | Eubacterial 16S | 18 |
968-f | AACGCGAAGAACCTTA | Sequencing | Eubacterial 16S | 18 |
1100-r | GGGTTGCGCTCGTTG | Sequencing | Eubacterial 16S | 18 |
T7 | TAATACGACTCACTATAGGG | Sequencing | pGEMT | Promega |
Sp6 | GATTTAGGTGACACTATAG | Sequencing | pGEMT | Promega |