TABLE 1.
Final grouping of the A. japonicus and A. aculeatus isolates after RFLP analysis of nuclear DNA and ITS1-5.8S rRNA gene-ITS2 sequencing
Group | Strain | EMBL accession no.a | Pattern based on:
|
|||||
---|---|---|---|---|---|---|---|---|
rDNA (SmaI) | pkiA (KpnI-XhoI) | 26S rRNA (KpnI-XhoI) | 26S rRNA (PstI-SalI) | pelA (PstI-SalI) | ITS1-5.8S rRNA gene-ITS2 | |||
A. japonicus | A. japonicus CBS 568.65 | AJ279991 | D | F | A | L | H | I |
A. japonicus CBS 522.89 | AJ279990 | D | F | A | L | H | I | |
A. japonicus CBS 101.14b | AJ279983 | D | F | A | M | H | I | |
A. atroviolaceus CBS 113.48Tc | AJ279984 | D | F | A | M | H | I | |
A. japonicus CBS 114.51T | AJ279985 | D | F | A | N | H | I | |
A. aculeatus CBS 611.78 | AJ279992 | D | F | A | N | I | I | |
A. aculeatus | A. japonicus CBS 114.34 | AJ279996 | D | G | B | I | L | II |
A. lucknowensis CBS 119.49 | AJ279986 | D | H | B | I | M | I | |
A. luchuensis CBS 116.80 | AJ279997 | D | G | B | P | L | II | |
A. luchuensis CBS 101.43 | AJ279995 | D | H | B | I | M | II | |
A. japonicus CBS 620.78 | AJ280002 | D | G | B | H | J | II | |
A. japonicus CBS 312.80 | AJ279989 | D | I | B | F | K | I | |
A. aculeatus CBS 172.66 | AJ279988 | D | J | B | H | N | I | |
A. aculeatus CBS 610.78 | AJ280001 | D | G | B | G | O | II | |
A. aculeatus CBS 186.67 | AJ279998 | D | G | B | J | P | II | |
A. aculeatus CBS 308.80 | AJ279999 | D | G | B | K | Q | II | |
A. aculeatus CBS 313.89 | AJ280000 | D | G | B | P | R | II | |
A. bruneo-violaceus CBS 621.78T | AJ280003 | D | G | B | O | T | II | |
? | A. aculeatus CBS 114.80 | AJ280005 | D | K | C | Q | S | III |
A. niger | A. niger CBS 120.49 | AJ280006 | B | B I | B | B | B | |
A. tubingensis | A. tubingensis CBS 643.92 | AJ280008 | C | B II | A | C | D | |
A. tubingensis | A. tubingensis CBS 127.49 | AJ280007 | C | NDd | A | C | D | |
A. foetidus | A. foetidus var. acidus CBS 564.65T | AJ280009 | C | B II | A | D | C | |
A. brasiliensis | A. brasiliensis IMI 381727 | AJ280010 | F | E | D | B | G | |
A. carbonarius | A. carbonarius CBS 111.26Te | AJ280011 | A | A | C | A | A | |
A. heteromorphus | A. heteromorphus CBS 117.55T | AJ280013 | E | D | A | E | F | |
A. ellipticus | A. ellipticus CBS 707.79T | AJ280014 | E | C | A | E | E |
EMBL accession number for the ITS1-5.8S rRNA gene-ITS2 region sequence.
Reclassified by Pařenicová et al. (25).
T = type strain.
ND, not determined.
Neotype strain.