Skip to main content
. 2022 Jul 8;23:495. doi: 10.1186/s12864-022-08711-5

Table 6.

Intact prophage regions identified by PHAST software into the CI133 and CI172 genomes

Region Region Length SCORE CDS
Region Position Contigs involved Possible Phage GC (%)
CI133 strain
 1 14.5 Kb 100 23 1,273,949–1,288,451 NODE_59_length_95536a PHAGE_Salmon_118970_sal3_NC_031940 50.67%
 4 42.9 Kb 150 22 3,351,842–3,394,802 NODE_298_length_13180 NODE_300_length_4451 NODE_303_length_8775 NODE_304_length_4965 NODE_305_length_11191 PHAGE_Phage_Gifsy_1_NC_010392 50.40%
 6 38.8 Kb 140 29 3,715,134–3,753,956

NODE_378_length_11128a NODE_379_length_11536 NODE_387_length_2174 NODE_388_length_2179

NODE_389_length_2269

NODE_390_length_3407

NODE_391_length_1539

NODE_394_length_10168

NODE_398_length_21406a

PHAGE_Entero_mEp460_NC_019716 50.77%
 12 36.4 Kb 100 30 4,298,371–4,334,788

NODE_916_length_55721a

NODE_925_length_549

NODE_937_length_1867

NODE_948_length_5860

NODE_950_length_762

NODE_954_length_3661

NODE_976_length_528

NODE_980_length_575

NODE_1017_length_47747a

PHAGE_Entero_BP_4795_NC_004813 48.57%
CI172 strain
 1 14 Kb 130 21 1,034,005–1,048,079

NODE_60_length_29546a

NODE_63_length_8773

PHAGE_Phage_Gifsy_1_NC_010392 51.61%
 2 14.5 Kb 100 22 1,119,930–1,134,432 NODE_64_length_94539a PHAGE_Salmon_118970_sal3_NC_031940 50.67%
 4 38.3 Kb 110 11 3,001,801–3,040,120

NODE_215_length_64273a

NODE_217_length_11752

NODE_218_length_11762

NODE_220_length_1372

NODE_221_length_5430a

PHAGE_Entero_mEp460_NC_019716 52.05%

aPartial contig sequence involved