| PPI | protein–protein interaction |
| CNS | central nervous system |
| POI | protein of interest |
| PIC | proximity-inducing compound |
| TPD | targeted protein degradation |
| CRBN | Cereblon |
| VHL | Von Hippel–Lindau tumor suppressor |
| DGRL | deep graph representation learning |
| PDB | Protein Data Bank |
| k-NN | k nearest neighbors |
| MLP | multilayer perceptron |
| AUROC | area under the receiver operating characteristic curve |