Table 4.
Step | Variable |
---|---|
Fixation | Time and temperature of cold ischemia before fixation; Choice of the fixative; Time of fixation; underfixation and overfixation |
Processing | Protocol of dehydration; Incubation time in xylene and paraffin; Temperature of melted paraffin |
Antigen retrieval | Type of antigen retrieval: heat-induced antigen retrieval (HIER) vs. enzymatic treatment vs. none |
HIER parameters | Mode: microwave vs. temperature; Temperature, time, pressure (if applicable); pH of the buffer: acidic (e.g., citrate; pH = 6.0), neutral (e.g., TBS; pH = 7.6) vs. basic (e.g., TEG; pH = 9.0) |
Primary antibody | Clonality (polyclonal vs. monoclonal), clone, isotype Dilution; Incubation time and temperature |
Visualisation system | Choice of the system |
Washing of tissue sections | Excessive or insufficient |