Table 1.

Spectral libraries.

Library	Ions	Peptides	Proteins	Genes
HeLa, nanoflow	260,785	161,325	9991	9973
HeLa, Evosep One	145,875	98,485	8201	8187
HeLa, two-organism	361,555	224,597	10,353	10,332
HeLa, two-organism, filtered	360,458	223,907	10,350	10,331
Yeast, two-organism	134,148	79,860	5134	5132
Yeast, two-organism, filtered	133,351	79,337	5113	5113