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. 2022 Jul 9;11:giac063. doi: 10.1093/gigascience/giac063

Table 4:

Genes with accelerated evolution in the P. borealis

Gene H0_lnl H1_lnl Likelihood ratio FDR No. of positively selected sites*
GPR161 −8,827.28 −8,798.95 56.66761 2.06E-13 5
RPL5 −3,991.54 −3,968.12 46.84587 2.3E-11 1
RSL24D1 −2,215.1 −2,192.93 44.35075 6.59E-11 14
PHB2 −4,815.8 −4,805.98 19.631658 1.61E-05 4
NAA10 −4,703.42 −4,694.3 18.237898 2.92E-05 4
IQCA1 −9,112.13 −9,103.79 16.684644 5.88E-05 2
SLC30A5 −10,574.5 −10,566.6 15.766218 8.6E-05 3
BMP10 −8,017.18 −8,010.17 14.034764 0.000196 4
STOML2 −5,414.16 −5,408.06 12.206464 0.000476 1
ACYP1 −1,855.62 −1,849.54 12.153438 0.000452 3
NIPSNAP3A −4,951.12 −4,946.47 9.296206 0.001968 1

H0_lnl: log likelihood given H0 (ω does not vary across the branches), H1_lnl: log likelihood given H1, *Number of positively selected sites with a BEB (Bayes Empirical Bayes) of > 0.95.