Table 4:
Gene | H0_lnl | H1_lnl | Likelihood ratio | FDR | No. of positively selected sites* |
---|---|---|---|---|---|
GPR161 | −8,827.28 | −8,798.95 | 56.66761 | 2.06E-13 | 5 |
RPL5 | −3,991.54 | −3,968.12 | 46.84587 | 2.3E-11 | 1 |
RSL24D1 | −2,215.1 | −2,192.93 | 44.35075 | 6.59E-11 | 14 |
PHB2 | −4,815.8 | −4,805.98 | 19.631658 | 1.61E-05 | 4 |
NAA10 | −4,703.42 | −4,694.3 | 18.237898 | 2.92E-05 | 4 |
IQCA1 | −9,112.13 | −9,103.79 | 16.684644 | 5.88E-05 | 2 |
SLC30A5 | −10,574.5 | −10,566.6 | 15.766218 | 8.6E-05 | 3 |
BMP10 | −8,017.18 | −8,010.17 | 14.034764 | 0.000196 | 4 |
STOML2 | −5,414.16 | −5,408.06 | 12.206464 | 0.000476 | 1 |
ACYP1 | −1,855.62 | −1,849.54 | 12.153438 | 0.000452 | 3 |
NIPSNAP3A | −4,951.12 | −4,946.47 | 9.296206 | 0.001968 | 1 |
H0_lnl: log likelihood given H0 (ω does not vary across the branches), H1_lnl: log likelihood given H1, *Number of positively selected sites with a BEB (Bayes Empirical Bayes) of > 0.95.