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Secondary structure prediction of the 5ʹ-terminal 159 nt of TBEV strain Neudoerfl (NC_001672.1), comprising the 5ʹUTR and the distal portion of the capsid protein coding region. The canonical 5ʹUTR organization of TBEV encompasses a Y-shaped SLA element (orange), as well as the hairpin loops CSA (blue), and CSB (green). The start codon is highlighted in red.
