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. 2022 Jun 22;11:e78496. doi: 10.7554/eLife.78496

Lipolysis of bone marrow adipocytes is required to fuel bone and the marrow niche during energy deficits

Ziru Li 1, Emily Bowers 2, Junxiong Zhu 3,4, Hui Yu 1, Julie Hardij 1, Devika P Bagchi 1, Hiroyuki Mori 1, Kenneth T Lewis 1, Katrina Granger 1, Rebecca L Schill 1, Steven M Romanelli 1, Simin Abrishami 2, Kurt D Hankenson 3, Kanakadurga Singer 1,2, Clifford J Rosen 5, Ormond A MacDougald 1,6,
Editors: Mone Zaidi7, Mone Zaidi8
PMCID: PMC9273217  PMID: 35731039

Abstract

To investigate roles for bone marrow adipocyte (BMAd) lipolysis in bone homeostasis, we created a BMAd-specific Cre mouse model in which we knocked out adipose triglyceride lipase (ATGL, Pnpla2 gene). BMAd-Pnpla2-/- mice have impaired BMAd lipolysis, and increased size and number of BMAds at baseline. Although energy from BMAd lipid stores is largely dispensable when mice are fed ad libitum, BMAd lipolysis is necessary to maintain myelopoiesis and bone mass under caloric restriction. BMAd-specific Pnpla2 deficiency compounds the effects of caloric restriction on loss of trabecular bone in male mice, likely due to impaired osteoblast expression of collagen genes and reduced osteoid synthesis. RNA sequencing analysis of bone marrow adipose tissue reveals that caloric restriction induces dramatic elevations in extracellular matrix organization and skeletal development genes, and energy from BMAd is required for these adaptations. BMAd-derived energy supply is also required for bone regeneration upon injury, and maintenance of bone mass with cold exposure.

Research organism: Mouse

Introduction

Adipocytes are found throughout the body, and can be classified generally into white, brown, beige/BRITE and bone marrow adipose tissues (BMAT); however, many other niche depots exist, and adipocyte subpopulations within specific depots have recently been identified (Bagchi et al., 2018; Emont et al., 2022; Sárvári et al., 2021). In an adult human, 50–70% of the bone marrow cavity is filled with BMAT, which contributes ~10% of the total body fat mass (Cawthorn et al., 2014). BMAT was identified in the 19th century, and has been assumed to play significant roles in local bone homeostasis and hematopoiesis (Li et al., 2018; Li and MacDougald, 2021). Clinical associations generally demonstrate inverse relationships between BMAT and bone mass (Shen et al., 2007), or BMAT and circulating immune cells (Polineni et al., 2020), which may be due to the interactions between cells within the bone marrow niche. In addition to bone marrow adipocytes (BMAds), the bone marrow niche contains osteoblasts, osteoclasts, hematopoietic cells, stromal/mesenchymal cells, blood vessels, and nerves (Vogler and Murphy, 1988). The relationships between BMAds, bone cells, and hematopoietic cells are influenced by their shared location within bone, an anatomically restricted system, such that expansion of one cell type is by necessity at the expense of others. For example, elevated BMAT is inversely correlated with low bone mass of aging and diabetes, whereas expansion of BMAT is associated with multiple hematopoietic disorders (Li and MacDougald, 2021). Mechanistic links underlying these associations have proven challenging to investigate because these often involve complex intercellular, endocrine, and/or central mechanisms.

In addition to serving as an energy source, BMAds potentially influence the marrow niche through cell-to-cell contact, release of extracellular vesicles, and secretion of adipokines (e.g. adiponectin and leptin) and cytokines (e.g. adipsin, RANK ligand, and stem cell factor; Aaron et al., 2021; Li et al., 2018). Removal of these stimuli in mouse models of lipodystrophy, which lack BMAT, results in increased bone mass (Corsa et al., 2021; Zou et al., 2020; Zou et al., 2019). However, use of these models to investigate direct effects of BMAT depletion is confounded by concurrent loss of white and brown adipose depots, which also regulate bone mass through myriad mechanisms, including secretion of adipokines (Riddle and Clemens, 2017; Zou et al., 2019). Although loss of BMAT in lipodystrophic mice was integral to the original finding that BMAT is a negative regulator of hematopoiesis, positive effects of BMAT on hematopoiesis have also been observed; these differences are attributed to use of distinct animal models and analysis of different skeletal sites (Ambrosi et al., 2017; Naveiras et al., 2009; Zhou et al., 2017). In rodents, there are two readily identifiable BMAd populations: constitutive BMAT (cBMAT) and regulated BMAT (rBMAT) (Scheller et al., 2015). cBMAT typically exists in distal tibia and caudal vertebrae, appears early in life, and has the histological appearance of white adipose tissue. rBMAT is found in proximal tibia and distal femur, and is comprised of single or clustered BMAds interspersed with hematopoietic cells. Although cBMAT generally resists change in response to altered physiological states, rBMAT expands with aging, obesity, diabetes, caloric restriction (CR), irradiation, and estrogen deficiency, and is reduced by cold exposure, β3-agonist, exercise, and vertical sleeve gastrectomy (Li et al., 2018; Li et al., 2019). These treatments also cause alterations to the skeleton and/or formation of blood cells, some of which may be secondary to effects on BMAds.

In contrast, BMAds have also been thought to fuel maintenance of bone and hematopoietic cellularity because of their shared physical location in the marrow niche. Indeed, Steele, 1884 wrote that fat in marrow 'nourishes the skeleton'; however, that conjecture has not been formally tested because current methods to target BMAds lack penetrance or cause recombination in other cell types, such as white adipocytes, osteoblasts, or bone marrow stromal cells, complicating the interpretation of interactions between BMAds and cells of the marrow niche. To circumvent this problem, we created a BMAd-specific Cre mouse model based on expression patterns of endogenous Osterix and Adipoq, and investigated the role of BMAds as a local energy source by deleting ATGL/Pnpla2, the rate-limiting enzyme of lipolysis. Consistent with Pnpla2 deficiency in white and brown adipocytes (Ahmadian et al., 2011), BMAd-Pnpla2-/- mice have impaired BMAd lipolysis, resulting in hypertrophy and hyperplasia of BMAT. Despite significant increases in bone marrow adiposity, hematopoietic abnormalities of BMAd-Pnpla2-/- mice are negligible under basal conditions. However, the recovery of bone marrow myeloid lineages following sublethal irradiation is impaired with CR, and is further reduced by BMAd-Pnpla2 deficiency. Similarly, the proliferative capacity of myeloid progenitors is also decreased with CR, and further inhibited in mice lacking BMAd-Pnpla2. Whereas alterations in bone parameters were not observed in ad libitum fed BMAd-Pnpla2-/- mice, bone loss occurred under conditions of elevated energy needs such as bone regeneration or cold exposure, or reduced energy availability such as CR. Reduction of bone mass in CR BMAd-Pnpla2-/- mice is likely due to impaired osteoblast functions such as expression of extracellular matrix genes and creation of osteoid. Gene profiling reveals that Pnpla2 deletion largely blocks CR-induced genes within pathways of extracellular matrix organization and skeletal development, indicating that BMAd-derived energy contributes to skeletal homeostasis under conditions of negative energy balance.

Results

Generation of a BMAd-specific Cre mouse model (BMAd-Cre)

Based on previous studies showing that Osterix traces to osteoblasts and BMAds, but not to white adipocytes (Chen and Long, 2013; Mizoguchi et al., 2014), we used CRISPR/Cas9 to create Osterix-FLPo mice with an in-frame fusion of Osterix and optimized FLPo, separated by a P2A self-cleaving sequence to allow independent functioning of the two proteins (Figure 1A). To validate tissue-specific expression and FLPo efficiency, we bred Osterix-FLPo mice to FLP-dependent EGFP reporter mice, and observed EGFP-positive osteocytes, osteoblasts, BMAds, and a subset of marrow stromal cells within the bone (Figure 1B and C).

Figure 1. Generation of a BMAd-specific Cre mouse model (BMAd-Cre).

(A) Efficacy of Osterix-FLPo was evaluated by crossing with FLP-dependent EGFP reporter to yield Osterix-EGFP. (B) Osterix-EGFP male mice at 16 weeks were sacrificed. Fresh tissue confocal microscopy was performed on bisected caudal vertebrae, distal tibia and proximal tibia. Red arrows indicate singly dispersed BMAds. Scale bar; 100 μm. (C) Frozen-sections of proximal tibial slides from Osterix-EGFP were stained with Anti-GFP (green) and DAPI (blue). Scale bar; 50 μm. (D) Schematic of how Osterix-FLPo recombines FLPo-activated Adipoq-Cre (FAC) in BMAd-Cre mice to restrict expression of Cre to BMAds. (E) BMAd-Cre mice were bred with mT/mG reporter mice and the resulting BMAd-mT/mG mice were sacrificed at 16 weeks of age. Cellular fluorescence was evaluated by fresh tissue confocal microscopy. Scale bar; 100 μm. (F) Proximal tibial sections from BMAd-mT/mG mice were stained with antibodies to tdTomato (red) and EGFP (green), and nuclei were counterstained with DAPI (blue). * indicates BMAds. Scale bar; 50 μm.

Figure 1.

Figure 1—figure supplement 1. Genotyping strategy and validation of BMAd-Cre.

Figure 1—figure supplement 1.

(A-C) Schematic of genotyping primer designing for Osterix-FLPo (A) and FLPo activated Adipoq-Cre (FAC; B), and representative genotyping results (C). Mut = Mutation; WT = wildtype; Ori = original band without conversion of reversed Cre cassette; Flipped = FLPo activated Cre (BMAd-Cre). + indicates the presence of insertion; - indicates wild type. (D) The flipped recombination band was found in mRNA of bone, but not WAT depots. Mice expressing Osterix-FLPo with or without FAC were sacrificed and mRNA was isolated. cDNAs from distal tibiae, caudal vertebrae, epididymal and subcutaneous WATs were used for PCR and agarose gel electrophoresis. + indicates the presence of insertion; - indicates wild type. (E) Representative image of genomic PCR sequencing aligned with the endogenous allele. (F) BMAd-Cre mice were bred with mT/mG reporter mice and the resulting BMAd-mT/mG mice were sacrificed at 16 weeks of age. Cellular fluorescence was evaluated by fresh tissue confocal microscopy. Scale bar; 100 μm. (G-I) Efficiency of BMAd-Cre recombinase is age- and allele-dependent. Fresh caudal vertebrae collected from BMAd-mT/mG mice at indicated ages were bisected and used for confocal imaging. Scale bar; 100 μm. (I) Quantification of EGFP+ BMAds.
Figure 1—figure supplement 2. Insertion of IRES-Cre cassette in the 3'UTR of endogenous Adipoq decreases expression of adiponectin but does not cause a metabolic or bone phenotype.

Figure 1—figure supplement 2.

(A-F) Endogenous adiponectin expression is decreased by IRES-Cre insertion. Mice expressing Osterix-FLPo with or without FAC were sacrificed. Epididymal WAT (eWAT), caudal vertebrae, distal tibiae and serum were collected. + indicates the presence of insertion; - indicates wild type. (A) mRNA expression of adiponectin in eWAT, caudal vertebrae and distal tibiae from BMAd-Cre (OSX+FAC+) WT, heterozygous, and homozygous mice. (B-C) Lysates from eWAT (B) and caudal vertebrae (C) were used for immunoblot analyses of adiponectin and FABP4, with α-tubulin and ERK2 as loading controls. Quantification was performed using Image J. (D-F) Non-denatured (D) and denatured (E) serum from BMAd-Cre WT, heterozygous, or homozygous mice was used for immunoblot analyses of adiponectin, with albumin as a reference protein. (F) High (HMW), medium (MMW), and low (LMW) molecular weight forms of adiponectin were quantified by Image J. (G-P) Hypoadiponectinemia does not cause detectable phenotypes. Male BMAd-Cre WT, heterozygote, or homozygote mice were sacrificed at 18 weeks of age. Soft tissues and bones were collected. (G-K) Body weight, glucose tolerance, and WAT depot weights were not changed in BMAd-Cre mice. (L-P) Trabecular and cortical bone parameters were determined by μCT. Data are expressed as mean ± SD. * indicates p<0.05 with one-way ANOVA with Tukey’s multiple comparisons test.
Figure 1—figure supplement 2—source data 1. Insertion of IRES-Cre cassette in the 3'UTR of endogenous Adipoq decreases expression of adiponectin but does not cause a metabolic or bone phenotype.

We next created FLPo-dependent Adipoq-Cre (FAC) mice, which contain an internal ribosome entry sequence (IRES) followed by FLPo-dependent Cre in reverse orientation within the 3’-untranslated region (UTR) of endogenous Adipoq gene (Figure 1D). FLPo expressed from the Osterix locus recombines Cre to the correct orientation in progenitors of osteoblasts and BMAds. However, because Adipoq is selectively expressed in adipocytes (Eguchi et al., 2011), Cre was expressed in BMAds, but not in osteoblasts or other adipose depots. Consistent with this schema, Cre in the correct orientation (flipped band, Figure 1—figure supplement 1A–C) was only observed in caudal vertebral DNA of mice that were positive for at least one copy each of Osterix (Mut band) and FAC (Ori band). The correct orientation of Cre (flipped band) was also observed in mRNA isolated from distal tibiae and caudal vertebrae, but not WAT depots, of Osterix-FLPo mice positive for FAC (Figure 1—figure supplement 1D). The correct insertion of the sequence in Adipoq 3'-UTR was validated by Sanger sequencing following genomic PCRs that spanned endogenous Adipoq sequences, homology arms, IRES and Cre (Figure 1—figure supplement 1E). To investigate the cell type specificity of Cre activity, we next bred BMAd-Cre mice to mT/mG reporter mice (Muzumdar et al., 2007; Figure 1E), in which all tissues and cells express red fluorescence (membrane-targeted tdTomato; mT) at baseline, and will express membrane-targeted EGFP in the presence of cell-specific Cre. We observed loss of tdTomato and gain of EGFP in BMAT depots of caudal vertebrae (tail) and tibiae, but not in brown or white adipose depots, or other tissues/organs such as liver, pancreas, muscle and spleen (Figure 1E and Figure 1—figure supplement 1F). To evaluate conditions optimal for Cre-induced recombination, we visualized conversion of tdTomato to EGFP in BMAd-Cre mice at various ages and with different FAC copy numbers (Figure 1—figure supplement 1G–H) and found that the proportion of EGFP-positive BMAds increased with age and number of FAC alleles. Indeed, Cre efficiency was ~80% in both male and female mice over 16 weeks of age with one Cre allele, and over 90% at 12 weeks of age in mice with two Cre alleles (Figure 1—figure supplement 1I).

Previous studies found that a randomly inserted Adipoq-Cre bacterial artificial chromosome (BAC) causes recombination in osteoblasts (Bozec et al., 2013; Eguchi et al., 2011; Mukohira et al., 2019); thus, we tested whether this observation is true in BMAd-Cre mice, which rely on endogenous Adipoq expression that is further restricted by Osterix. When BMAd-Cre mice were bred to mT/mG reporter mice, only tdTomato-positive cells were detectable on trabecular bone surfaces (Figure 1F), suggesting that osteoblasts were not targeted. However, labeling of a small subset of stromal/dendritic cells was consistently observed, likely due to expression of Adipoq within this cell population (Mukohira et al., 2019).

Although insertion of the FLPo-activated Cre cassette into the 3’-UTR of endogenous Adipoq overcomes potential problems that arise from random genomic integration, we considered the possibility that placement of the IRES-Cre cassette within the 3’-UTR might alter the expression and/or secretion of endogenous adiponectin. We found that insertion of the IRES-Cre cassette caused a small, non-significant decrease in Adipoq mRNA expression in whole caudal vertebrae or distal tibiae, whereas adiponectin mRNA in white adipose tissue was elevated by more than threefold (Figure 1—figure supplement 2A). Thus, the cassette itself did not limit expression of mRNA. Instead, it appeared that the 2 kb IRES-Cre cassette within the 3'-UTR impairs translatability of the mRNA since expression of adiponectin protein in WAT and BMAT was decreased by ~50% (Figure 1—figure supplement 2B and C). Circulating adiponectin concentrations were decreased even further (Figure 1—figure supplement 2D–F), suggesting that flux of translated adiponectin protein was impaired through the secretion pathway. Of note, hypoadiponectinemia is associated with insulin resistance (Cook and Semple, 2010; Li et al., 2021), with discrepant effects reported on osteogenesis (Lewis et al., 2021). Thus, we evaluated systemic metabolism in BMAd-Cre mice and found that body weight, glucose tolerance, WAT depot weights, and tibial trabecular and cortical bone variables were unaffected by this degree of hypoadiponectinemia (Figure 1—figure supplement 2G–P). To minimize variability between treatments, all mice used in the following studies were positive for both Osterix-FLPo (predominantly two alleles) and FAC (mostly two alleles). Gene knockout mice and their controls were determined by the presence or absence of floxed alleles, respectively.

Ablation of adipose triglyceride lipase (ATGL, Pnpla2) causes BMAT expansion

A fundamental function of adipocytes is to store excess energy as triacylglycerols and to release non-esterified fatty acids (NEFA) and glycerol during times of negative energy balance. ATGL is the first and rate-limiting enzyme in the lipolytic process; thus, to determine the physiological functions of BMAd lipolysis in bone metabolism and hematopoiesis, we generated BMAd-Pnpla2-/- mice, in which the gene encoding ATGL, Pnpla2, was specifically deleted in BMAds. We validated the deletion of ATGL in caudal vertebrae, because cBMAT is abundant in this location. Mutant Pnpla2 mRNA was observed in caudal vertebrae of BMAd-Pnpla2 mice, but not in WAT (Figure 2A). Possible sources for the remaining wildtype (WT) Pnpla2 signal include periosteal WAT, non-adipocyte cells, or perhaps from incomplete deletion of Pnpla2 in BMAds. Immunofluorescent staining confirmed loss of ATGL in proximal tibial rBMAds of BMAd-Pnpla2-/- mice (Figure 2B). ATGL protein was reduced substantially in caudal vertebrae, but not in subcutaneous WAT (Figure 2C), which further confirmed specificity of BMAd-Cre recombinase for BMAT.

Figure 2. Ablation of adipose triglyceride lipase (ATGL; gene name Pnpla2) increases size and number of BMAd.

Figure 2.

(A-J) Male mice of the indicated genotypes at 24 weeks of age were euthanized for investigation of white adipose tissue (WAT) and bone. (A) RNA was extracted from WAT and caudal vertebrae, and converted to cDNA. PCR products for wildtype (WT; 1257 bp) Pnpla2 and exon 2–7 knockout (Mut; 553 bp) bands were visualized. (B) Decalcified proximal tibiae were sectioned and used for immunofluorescent staining for ATGL (green) expression. Slides were counterstained with DAPI (blue) for nuclei. Scale bar; 50 μm. (C) Immunoblot analyses of ATGL, α-tubulin, and ERK2 in lysates from subcutaneous WAT and caudal vertebral. (D-F) Decalcified tibiae were stained with osmium tetroxide and visualized by μCT (D). BMAT in proximal (E) and distal (F) tibia was quantified. Data are expressed as mean ± SD. * indicates p<0.05 with a two-sample t-test. (G–H) Decalcified tibiae were paraffin-sectioned and stained with Hematoxylin & Eosin. Representative pictures were taken from proximal (G) and distal (H) tibia. Scale bar; 200 μm. (I-J) BMAd sizes from proximal (I) and distal (J) tibiae were quantified with MetaMorph software. Data are expressed as mean ± SD. * indicates p<0.05 with two-way ANOVA with Sidak’s multiple comparisons test. (K–M) Distal tibial BMAT was flushed from female BMAd-Pnpla2-/- and their wildtype littermates at 24 weeks of age. For each n, distal tibial explants from two mice were combined per well and cultured in 2% BSA-HBSS solution (K). Subgroups from each genotype were treated with forskolin (FSK, 5 μM) or vehicle (Veh, DMSO). Glycerol (L) and non-esterified fatty acid (NEFA; M) in culture media at indicated time points were measured by colorimetric assay (n=3–4 per treatment). * indicates Pnpla2+/+ (FSK) different from Pnpla2+/+ (Veh) and from Pnpla2-/- (FSK) with p<0.05 with three-way ANOVA followed by Sidak’s multiple comparisons test.

Figure 2—source data 1. Ablation of adipose triglyceride lipase (ATGL; gene name Pnpla2) increases size and number of BMAd.

To quantify effects of Pnpla2-deficiency on bone marrow adiposity and cellularity, we used osmium tetroxide, and hematoxylin and eosin staining, to evaluate BMAT quantity and cellular details, respectively. We found that BMAT volume was significantly increased in proximal tibiae and throughout the endocortical compartment of BMAd-Pnpla2-/- mice, whereas differences in BMAT volume were not observed in distal tibiae, which was almost completely occupied by BMAT in control mice (Figure 2D–F). Histological analyses revealed increased BMAd number in proximal tibiae of BMAd-Pnpla2-/- mice (Figure 2G and H). Depletion of Pnpla2 also caused BMAd hypertrophy in both proximal and distal tibia, with an increased proportion of BMAds larger than 500 μm2 observed in proximal tibia, and larger than 1000 μm2 observed in distal tibia (Figure 2I and J). Secretion of basal glycerol and NEFA from ex vivo cultured explants of distal tibial BMAT was not different between genotypes. On the other hand, forskolin treatment greatly increased lipolysis in BMAT explants from control mice, but secretion of glycerol and NEFA from BMAd-Pnpla2-/- explants remained unchanged from basal rates (Figure 2K–M). These results confirm that BMAds of BMAd-Pnpla2-/- mice have impaired lipolysis.

BMAd lipolysis is required to maintain bone homeostasis in male mice under conditions of CR, but not when mice are fed ad libitum

We next evaluated whether loss of BMAd lipolysis in male BMAd-Pnpla2-/- mice is sufficient to influence systemic physiology, or function of bone cells within the marrow niche. In mice fed normal chow ad libitum, we did not observe differences in body weight, glucose tolerance, or weights of soft tissue, including subcutaneous WAT (sWAT), epididymal WAT (eWAT), and liver (Figure 3—figure supplement 1A-E), which further confirmed the tissue-specificity of our BMAd-Pnpla2 knockout model. As observed above, Pnpla2 deficiency caused expansion of proximal tibial rBMAT (Figure 3—figure supplement 1F and G). Interestingly, when dietary energy was readily available, trabecular bone volume fraction, bone mineral density and trabecular number tended to be lower in BMAd-Pnpla2-/- mice, but statistical differences were not observed (Figure 3A–C).

Figure 3. BMAd lipolysis is required to maintain bone homeostasis in male mice under CR conditions, but not when mice are fed ad libitum.

(A-C) Male BMAd-Pnpla2-/- and their BMAd-Pnpla2+/+ littermates with ad libitum feeding were euthanized at 24 weeks of age. Two independent age- and sex- matched cohorts were plotted together. Tibiae from ad libitum mice were analyzed by μCT for indicated trabecular (Tb.) bone variables. BV/TV: bone volume fraction; Conn. Dens: connective density; BMD: bone mineral density; N: number; Th: thickness; Sp: separation. Scale bars indicate 500 μm. (D-M) Male mice at 18 weeks of age underwent 30% CR for 6 weeks. Two independent age- and sex- matched cohorts were plotted together for μCT parameters (D-F), one of those two cohorts was used for ELISA, and static or dynamic histomorphometry (G-M). (D-F) Tibiae from CR mice were analyzed by μCT for indicated trabecular bone variables. Scale bar; 500 μm. (G-H) Static histomorphometry analyses were performed to calculate osteoblast number (Ob. N), osteoclast number (OC. N) and osteoclast surface (Oc. S) per bone surface (BS). (I-J) Concentrations of circulating P1NP and TRACP5b in CR mice were measured. (K) Osteoid quantification was performed on undecalcified plastic sections with Goldner’s Trichrome staining. (L-M) Dynamic histomorphometry was performed on calcein-labelled trabecular bone from proximal tibia. sLS: single-labelled surface; MS: mineralized surface; Ir.L.Wi: inter-label width; MAR: mineral apposition rate. Data are expressed as mean ± SD. * indicates p<0.05 with a two-sample t-test. In addition, multiple unpaired t tests had been performed crossing all parameters, p values were adjusted for multiple comparisons using Two-stage step-up (Benjamini, Krieger, and Yekutieli) with FDR method. Adjusted p values are shown in Figure 3—source data 1.

Figure 3—source data 1. BMAd lipolysis is required to maintain bone homeostasis in male mice under CR conditions, but not when mice are fed ad libitum.

Figure 3.

Figure 3—figure supplement 1. Blocking BMAd-lipolysis does not influence global metabolism when mice are fed ad libitum or calorically restricted.

Figure 3—figure supplement 1.

(A-I) BMAd-Pnpla2-/- male mice and littermate controls (Pnpla2+/+) were fed ad libitum until 24 weeks of age. Body weight (A), glucose tolerance test (B), and weights of subcutaneous WAT (sWAT), epididymal WAT (eWAT), and liver (C-E) were recorded. Decalcified tibiae were used for osmium tetroxide-staining and quantified by μCT analyses to measure the BMAT volume from proximal to distal ends, as indicated by boxed regions (F-G). Concentrations of glycerol and NEFA in serum (H) and bone marrow supernatant (I) were measured with colorimetric assay kits. Glycerol and NEFA contents in bone marrow supernatant were normalized to protein concentrations. (J-U) BMAd-Pnpla2-/- male mice and littermate controls (Pnpla2+/+) at 18 weeks of age and underwent a 30% CR for 6 weeks. Body weight changes (J) and glucose tolerance (K) were recorded. sWAT (L), eWAT (M), and liver (N) weights were measured during dissection. BMAT volume at different locations were quantified in osmium tetroxide-stained bones following μCT scanning (O-P). Representative images of proximal tibial rBMAT are shown (Q). Quantitative analyses of BMAd sizes were performed using MetaMorph software (R-S). Concentrations of glycerol and NEFA in serum (T) and bone marrow supernatant (U) were measured using colorimetric assays. Glycerol and NEFA contents in bone marrow supernatant were normalized to protein concentrations. (V) Immunoblot analyses of circulating adiponectin under non-reducing and non-heat-denaturing conditions (top panel), and denaturing conditions (middle panel), with albumin as a loading control (low panel). HMW: high molecular weight forms; MMW: medium molecular weight forms; LMW: low molecular weight. Data are expressed as mean ± SD. * indicates p<0.05 with a two-sample t-test.
Figure 3—figure supplement 1—source data 1. Blocking BMAd-lipolysis does not influence global metabolism when mice are fed ad libitum or calorically restricted.
Figure 3—figure supplement 2. Cortical bone variables in BMAd-Pnpla2-/- mice and other possible mechanisms for bone loss in BMAd-Pnpla2-/- CR mice.

Figure 3—figure supplement 2.

(A-D) Mouse tibiae from 24 weeks old ad libitum (A-B) or CR (C-D) mice were collected. Cortical bone area (CT. BA/TA) and thickness (Ct. Th) were measured by μCT. Scale bar; 500 μm. (E-J) BMAd-Pnpla2-/- male mice and littermate controls (Pnpla2+/+) were fed ad libitum until 24 weeks of age. (E-F) Proximal tibial static histomorphometry was performed to calculate osteoblast number (Ob. N), osteoclast number (OC. N) and osteoclast surface (Oc. S) per bone surface (BS). (G-J) Circulating P1NP, RANKL, CTX-1 and TRACP5b were measured with commercially available ELISA kits. (K-N) BMAd-Pnpla2-/- male mice and littermate controls (Pnpla2+/+) at 18 weeks of age underwent a 30% CR for 6 weeks. (K-L) Circulating RANKL and CTX-1 were measured with commercially available ELISA kits. (M-N) Histomorphometry analysis for osteoid surface and osteoid maturation time (Omt). Data are expressed as mean ± SD. * indicates p<0.05 with a two-sample t-test.
Figure 3—figure supplement 2—source data 1. Cortical bone variables in BMAd-Pnpla2-/- mice and other possible mechanisms for bone loss in BMAd-Pnpla2-/- CR mice.
Figure 3—figure supplement 3. BMAd lipolysis is not required in female mice to maintain bone homeostasis under CR conditions.

Figure 3—figure supplement 3.

BMAd-Pnpla2-/- female mice and their wildtype controls (Pnpla2+/+) at 18 weeks of age were fed ad libitum (AL) or underwent a 30% CR for another 6 weeks. (A-B) Final body weight and random glucose levels were measured (A). sWAT, parametrial WAT (pmWAT), liver and spleen weights were recorded during dissection (B). (C) Representative images from proximal tibiae were collected from decalcified and paraffin-sectioned bones. Scale bar; 200 μm. Quantification of BMAT surface area was finished by Image J. (D-E) Trabecular and cortical bone variables were determined by μCT analysis. (F) Complete blood counts (CBC) were performed to measure white and red blood cells in circulation. Data are expressed as mean ± SD. * indicates p<0.05 with two-way ANOVA analysis followed by Šídák’s multiple comparisons test. Significant effects of genotype or diet as well as trends are shown.
Figure 3—figure supplement 3—source data 1. BMAd lipolysis is not required in female mice to maintain bone homeostasis under CR conditions.
Figure 3—figure supplement 4. BMAd-lipolysis impairment in estrogen-deficient female mice does not affect CR-induced bone changes.

Figure 3—figure supplement 4.

Female mice at 16 weeks of age underwent ovariectomy and recovered for 2 weeks, which were followed by 30% CR for 12 weeks.+ indicates OVX or CR, - indicates sham or ad libitum, respectively. Changes in body weight (A) and glucose tolerance test (B) were recorded. Femoral and tibial lengths were measured (C). Weights of sWAT, pmWAT, liver, spleen, and uterus were measured during dissection (D). Representative images of proximal tibial BMAT were shown (E). Trabecular bone parameters were determined by μCT (F). Tb.: trabecular bone; BV/TV: bone volume fraction; BMD: bone mineral density; N: number; Th: thickness; Sp: separation. Green dots show bone variable measurements from a sex- and age- matched independent cohort of sham ad libitum (OVX -; CR -) mice. Data are expressed as mean ± SD. * indicates p<0.05 with two-way ANOVA analysis followed by Šídák’s multiple comparisons test. Significant effects of genotype or diet as well as trends are shown. Sham ad libitum group is not included for statistical analyses.
Figure 3—figure supplement 4—source data 1. BMAd-lipolysis impairment in estrogen-deficient female mice does not affect CR-induced bone changes.

Our experiments in ad libitum fed mice suggest that energy released from BMAds is dispensable for bone cell functioning when dietary energy is plentiful, which is supported by the comparable concentrations of glycerol and NEFA in circulation and in bone marrow supernatant in BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice (Figure 3—figure supplement 1H and I). To determine whether male BMAd-Pnpla2-/- mice have impaired bone homeostasis when dietary energy is limited, we next challenged mice with a 30% CR for 6 weeks. BMAd-Pnpla2-/- mice did not have altered body weight, glucose tolerance, or tissue weights comparing with their controls (Figure 3—figure supplement 1J-N), suggesting that BMAds were not a critical source of circulating energy under these conditions. Although Pnpla2-/- mice fed ad libitum had increased rBMAT compared to controls (Figure 3—figure supplement 1F and G), CR stimulated rBMAT expansion in control mice such that BMAT volume and BMAd size were comparable between genotypes (Figure 3—figure supplement 1O-S). Despite having a similar amount of rBMAT, BMAd-Pnpla2-/- mice fed CR diet had reduced trabecular bone volume fraction, connective density, and bone mineral density when compared to controls (Figure 3D and E). This reduction in bone mass is due to decreased trabecular bone number and increased trabecular spacing, without effects on trabecular thickness (Figure 3F). BMAds are a source of NEFA for vicinal osteoblasts (Maridas et al., 2019); thus, the reduction in trabecular bone in CR BMAd-Pnpla2-/- mice likely resulted from impaired osteoblast function due to insufficient energy available in the bone marrow niche. Consistent with this notion, we observed a trend (p=0.07) towards reduced NEFA concentrations in bone marrow supernatant of CR BMAd-Pnpla2-/- mice, whilst circulating glycerol and NEFA concentrations were not different between genotypes (Figure 3—figure supplement 1T and U). Although FAC mice have hypoadiponectinemia at baseline, circulating adiponectin was still increased dramatically in response to CR. Comparable adiponectin concentrations between BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice (Figure 3—figure supplement 1V) excludes the possibility that differences in circulating adiponectin may confound the bone phenotype in BMAd-Pnpla2-/- mice. Finally, changes in cortical bone area and thickness were not observed in BMAd-Pnpla2-/- mice with either ad libitum or CR diet (Figure 3—figure supplement 2A-D), perhaps because cortical bone surfaces are less active.

To investigate mechanisms underlying trabecular bone loss in CR BMAd-Pnpla2-/- mice, we next measured circulating markers of bone cell activity and performed histomorphometry. Osteoblast and osteoclast numbers and osteoclast surface were not changed by BMAd-Pnpla2 deficiency under ad libitum conditions (Figure 3—figure supplement 2E and F). Although circulating markers of bone formation (P1NP) and osteoclast activation (RANK Ligand) were not altered in BMAd-Pnpla2-/- mice, markers for bone resorption (CTX-1) and osteoclast activation (TRACP5b) were decreased or showed a strong trend towards reduction, respectively (Figure 3—figure supplement 2G-J). Although with CR, osteoblast numbers were not altered by a deficiency of BMAT lipolysis, the bone formation marker P1NP was decreased (Figure 3G and I), suggesting that osteoblast functions were impaired. Osteoclast numbers were increased in CR BMAd-Pnpla2-/- mice, but the osteoclast surface per bone surface (Oc.S/BS) was not changed and the osteoclast activation marker, TRACP5b, was decreased (Figure 3H and J), suggesting osteoclast function was inhibited. No differences were observed in RANK Ligand and CTX-1 with CR (Figure 3—figure supplement 2K and L). We then visualized and quantified osteoid thickness with Goldner’s trichrome staining and observed a trend towards thinner osteoid layers without affecting osteoid surface (Figure 3K and Figure 3—figure supplement 2M), which could be secondary to impaired secretion of collagen matrix by osteoblasts or to enhanced bone mineralization. Further, we injected mice with calcein to label those bone surfaces undergoing active mineralization. Dynamic histomorphometry data suggests that BMAd-Pnpla2-/- mice had less bone-forming surface, as indicated by reduced single-labelled surface (sLS) and mineral surface (MS) (Figure 3L). There were no differences in double-labelled bone surface, inter-label width, mineral apposition rate or osteoid maturation time (Figure 3M and Figure 3—figure supplement 2N), suggesting that bone mineralization is not affected by loss of BMAd lipolysis. Taken together, these data support a model in which reduced trabecular bone in BMAd-Pnpla2-/- mice is likely due to impaired ability of osteoblasts to secrete osteoid.

BMAd lipolysis is not required to maintain bone homeostasis under calorie-restricted conditions in female mice

To determine whether sex influences responses of BMAd-Pnpla2-/- mice to CR, we performed similar experiments in female mice at 20 weeks of age. As expected, after six weeks of CR, both control and knockout mice exhibited comparable reduced body weights, random blood glucose concentrations, and tissue weights (Figure 3—figure supplement 3A and B). CR or Pnpla2 deficiency caused expansion of proximal tibial rBMAT, which was further increased in CR BMAd-Pnpla2-/- mice (Figure 3—figure supplement 3C). Whereas CR increased trabecular bone BV/TV, and decreased Tb. Sp, BMAd Pnpla2 deletion did not cause changes in trabecular or cortical bone variables in female mice (Figure 3—figure supplement 3D and E). In addition, complete blood cell analyses did not reveal substantial differences in white or red blood cell populations influenced by diet or genotype (Figure 3—figure supplement 3F).

We next considered whether estrogen protects female mice from CR-induced osteoporosis. Thus, we ovariectomized control and BMAd-Pnpla2-/- mice 2 weeks prior to initiation of CR. Following initiation of CR, both control and knockout mice demonstrated rapid reduction in body weight for 2 weeks, then gradually stabilized during the following ten weeks (Figure 3—figure supplement 4A). We did not observe significant differences in glucose tolerance or bone length with CR or Pnpla2 deletion (Figure 3—figure supplement 4B and C). Although CR caused reduction in WAT and spleen weights, these variables were generally not different between genotypes (Figure 3—figure supplement 4D). Interestingly, despite the dramatic increases of BMAT with CR or BMAd-Pnpla2 deficiency, OVX-associated trabecular bone loss was partially eliminated by CR treatment, which was evidenced by a relative increase in bone volume fraction (Tb. BV/TV) and trabecular number (Tb. N) (Figure 3—figure supplement 4E and F). These data suggest that the metabolic benefits of CR diet may combat detrimental effects of estrogen deficiency and/or aging. Although not observed in intact mice, with OVX Pnpla2-deficient mice, the loss of BMAd ATGL caused a slight reduction in trabecular bone mineral density (Tb. BMD) and thickness (Tb. Th) compared to OVX controls (revealed by two-way ANOVA analysis) (Figure 3—figure supplement 4F).

BMAd lipolytic deficiency impairs myelopoiesis during regeneration

A single rBMAd connects to almost 100 hematopoietic cells (Robles et al., 2019), suggesting that BMAds potentially serve as important local energy sources for hematopoiesis. However, when fed ad libitum, male BMAd-Pnpla2-/- mice did not exhibit differences in mature blood cells populations, as assessed by complete blood cell counts (Supplementary file 1) or in bone marrow hematopoietic cell populations, as assessed by flow cytometry (Supplementary file 2 and Figure 4—figure supplement 1A and B). However, we did observe a reduced percentage of bone marrow mature neutrophils in CR BMAd-Pnpla2-/- mice (Supplementary file 1, Supplementary file 2), perhaps due to impaired maturation of granulocytes. These data suggest that although neutrophil defects were observed in CR BMAd-Pnpla2-/- mice, other hematopoietic cell populations can metabolically compensate for the lack of BMAd lipolytic products.

To investigate further whether hematopoiesis is dependent upon BMAd lipolysis, we administered a sublethal dose of whole-body irradiation, and evaluated hematopoietic cell recovery. Following irradiation, white and red blood cell depletion and recovery were monitored by complete blood cell counts every 2–3 days (Figure 4—figure supplement 1C-E). During the recovery phase, three-way ANOVA analyses revealed that differences in time (days) and diet (AL vs CR) were observed for total white blood cells, lymphocytes, and red blood cells, while significant interactions between genotype (BMAd-Pnpla2+/+ vs BMAd-Pnpla2-/-) and time were observed for neutrophils, eosinophils and basophils, suggesting BMAd-Pnpla2 deficiency specifically influenced myeloid lineage cells. Nine days after irradiation, HSPCs (Figure 4—figure supplement 1F and G) and mature/immature hematopoietic cells (Figure 4A–H) were not influenced by deficiency of BMAd-lipolysis in ad libitum fed mice. However, CR decreased bone marrow cellularity (BMNC) (Figure 4A), and most HSPC populations in control mice (Figure 4—figure supplement 1F and G). Two-way ANOVA also revealed inhibitory effects of CR on monocytes and neutrophils, without changes to lymphocytes (Figure 4B–E). In BMAd-Pnpla2-/- mice, HSPCs were not altered by CR except for PreMegE cells, which were suppressed. Bone marrow cellularity, monocytes, and neutrophils were also decreased in CR BMAd-Pnpla2-/- mice. The recovery of neutrophils, preneutrophils, immature and mature neutrophils following irradiation was impaired by CR, and Pnpla2-deficiency further reduced ability of neutrophils and mature neutrophils to regenerate (Figure 4E–H). These reductions in monocytes and neutrophils in CR BMAd-Pnpla2-/- mice suggest that BMAd-lipolysis is required for myeloid cell lineage regeneration when energy supply from circulation is limited. CFU assays, which were optimized for the growth of myeloid progenitor cells (CFU-Granulocytes, CFU-Macrophages and CFU-GM), demonstrated a trend towards fewer granulocyte progenitor colonies (CFU-G) from CR BMAd-Pnpla2-/- mice (Figure 4I). The proliferative capacity of macrophage progenitors (CFU-M) was impaired when derived from BMAd-Pnpla2-/- mice fed ad libitum, or when derived from CR mice of either genotype (Figure 4J). CR marrow produced fewer granulocyte-macrophage progenitors (CFU-GM), which was further reduced when isolated from mice with impaired BMAd-lipolysis (Figure 4K). These data suggest that proliferative and differentiation capacities of cultured myeloid cell progenitors may have been reprogrammed in the marrow niche when their energy supply was limited either by CR or impaired BMAd lipolysis (Figure 4L).

Figure 4. BMAd-Pnpla2 deficiency impairs myelopoiesis.

(A-H) BMAd-Pnpla2-/- mice and littermate controls (Pnpla2+/+) were caloric restricted (CR; +) for 20 weeks or remained on an ad libitum diet (-), and then received whole-body irradiation (6 Gy). Mice were euthanized 9 days post-irradiation. Femurs were collected for flow cytometry to measure the regeneration of hematopoietic cells. Bone marrow mononuclear cells (BMNCs), monocytes, B and T lymphocytes and neutrophils were quantified. (I-L) CFU assays. Femora and tibial bone marrow cells were isolated from BMAd-Pnpla2-/- mice and littermate controls (Pnpla2+/+), which had been fed ad libitum (-) or a caloric restricted (CR; +) diet for 20 weeks. After counting, 1 × 104 cells were plated for CFU assays. Colonies were counted by an independent expert in a blinded manner 7 days after plating. Data are expressed as mean ± SD. * indicates p<0.05 with two-way ANOVA analyses followed by Šídák’s multiple comparisons test. Significant effects of genotype, diet, or their interactions are shown, as are trends.

Figure 4—source data 1. BMAd-Pnpla2 deficiency impairs myelopoiesis.

Figure 4.

Figure 4—figure supplement 1. Flow cytometry strategies for hematopoietic cells and sublethal irradiation-induced hematopoietic regeneration in BMAd-Pnpla2-/- mice.

Figure 4—figure supplement 1.

(A-B) Hematopoietic cell gating strategies in hematopoietic stem/progenitor cells (HSPC, A) and mature leukocytes (B). (C-G) BMAd-Pnpla2-/- mice and littermate controls (Pnpla2+/+) underwent 30% caloric restriction (CR; +) for 20 weeks or remained on ad libitum (AL; -) diet, and then received a whole-body irradiation (6 Gy). Tail vein blood (~50 µl) was collected every 2–3 days to monitor hematopoietic cell recovery. Mice were euthanized at day 9 post-irradiation. (C-E) Data from complete blood cell counts shows dynamic changes of white and red blood cells before and after irradiation. Three-way ANOVA analyses with Sidak’s multiple comparisons test were performed. (F-G) Hematopoietic cells from femurs were stained with cell markers to identify hematopoietic stem and progenitor cells. Data are expressed as mean ± SD. * indicates p<0.05 with two-way ANONA analysis followed by Šídák’s multiple comparisons test. Significant effects of genotype, diet, or their interactions are shown.
Figure 4—figure supplement 1—source data 1. Flow cytometry strategies for hematopoietic cells and sublethal irradiation-induced hematopoietic regeneration in BMAd-Pnpla2-/- mice.

Coupling of BMAd Pnpla2 deletion and CR results in extensive alterations to the bone marrow transcriptome

To determine mechanisms by which BMAd Pnpla2 deficiency causes bone loss in CR male mice, we profiled overall gene expression using bulk RNA sequencing (RNAseq) in bone marrow plugs from distal tibiae, a skeletal location highly enriched with BMAT. PCA plots showed that RNA profiles from CR groups were distinct from ad libitum controls (Figure 5—figure supplement 1A). Whereas Pnpla2 deficiency did not cause gene expression to diverge substantially in mice fed ad libitum, loss of Pnpla2 interacted with CR to cause a well-segregated pattern of gene expression (Figure 5—figure supplement 1A). By our criteria (padj <0.05, |log2 fold change|>1), CR changed expression of 1026 genes compared to ad libitum controls (left). Although Pnpla2 deficiency alone only altered 10 genes in BMAd-Pnpla2-/- mice fed ad libitum (middle), loss of Pnpla2 in CR mice caused alterations in 1060 genes (right) (Figure 5—figure supplement 1B). Analyses of genes regulated in BMAd-Pnpla2+/+ mice with CR revealed four distinct clusters (Figure 5A). Approximately 80% of genes fell in cluster 1, which contained genes upregulated by CR in control mice, with induction largely blocked by Pnpla2 deficiency in CR mice. Pathway analyses of cluster 1 with Metascape (https://metascape.org) revealed that regulated genes were associated with vasculature development and cellular response to growth factor stimulus, which likely reflects adaptation mechanisms to compensate for energy insufficiency (Figure 5—figure supplement 1C). In addition, genes associated with skeletal system development, extracellular matrix organization, and adipogenesis pathways were upregulated by CR in control mice, but these effects were blunted by Pnpla2 deletion (Figure 5—figure supplement 1C). Cluster 2 includes genes that were mildly upregulated by CR in control mice and were further increased with Pnpla2-deficiency. Although no specific pathways were enriched in this gene set, upregulation of two monocarboxylate transporters, Slc16a11 and Slc16a4, suggests a potential mechanism for fueling cellular metabolism, and perhaps for the energy source underlying expansion of BMAd with CR and BMAd Pnpla2 deletion (Figure 5—figure supplement 1D). Cluster 3 highlighted genes that were downregulated by CR treatment regardless of genotype (Figure 5—figure supplement 1E), and that were associated with B cell proliferation and interleukin-8 production, which may partially explain changes in hematopoietic cellularity. Cluster 4 contained 80 genes that were down-regulated independently by CR and Pnpla2-deficiency, and were associated with regulation of ossification and calcium-mediated signaling (Figure 5—figure supplement 1F).

Figure 5. BMAd-Pnpla2 deficiency causes extensive alterations to the bone marrow transcriptome only when coupled with CR.

Male control and BMAd-Pnpla2-/- mice at 24 weeks of age were either fed AL or underwent 30% CR for 6 weeks. Distal tibial cBMAT was flushed and cBMAT from two mice was pooled as one sample for RNAseq analyses (n of 3 or 4 per treatment). (A) Differential genes with our criteria (padjj <0.05 and |Log2 fold change|>1) between BMAd-Pnpla2+/+ CR and BMAd-Pnpla2+/+ad libitum (AL) were grouped into 4 clusters. (B) Genes different between BMAd-Pnpla2+/+ CR and BMAd-Pnpla2+/+ AL were ordered from maximum to minimum log2 fold change (red dots), and compared to corresponding data from BMAd-Pnpla2-/- CR versus BMAd-Pnpla2-/- AL (blue dots). Venn diagram shows the differential genes between BMAd-Pnpla2+/+ CR versus BMAd-Pnpla2+/+ AL BMAT; and BMAd-Pnpla2-/- CR versus BMAd-Pnpla2-/- AL BMAT. (C) Pathway analyses of genes significantly changed by CR in BMAd-Pnpla2+/+ mice, but not in CR mice lacking Pnpla2 (indicated by * area in panel B). Pathways further analyzed by heatmap indicated with blue arrows. (D-F) Expression Z-scores of genes related to adipogenesis (D), skeletal system development (E) and extracellular matrix organization (F) were shown as heatmap. Effects of genotype and diet, and their interactions were analyzed by three-way ANOVA.

Figure 5—source data 1. BMAd-Pnpla2 deficiency causes extensive alterations to the bone marrow transcriptome only when coupled with CR.
elife-78496-fig5-data1.xlsx (230.4KB, xlsx)

Figure 5.

Figure 5—figure supplement 1. CR causes profound changes in BMAT transcriptome.

Figure 5—figure supplement 1.

Twenty-four weeks old male mice underwent 30% CR for 6 weeks. Distal tibial cBMAT was flushed and cBMAT from two mice were pooled as one sample for RNA sample preparation. High-quality RNA samples were submitted for RNAseq analyses. (A) Principal component analysis (PCA) plot shows the distinct transcriptional characters in CR groups with (purple dots) or without (aqua dots) Pnpla2 in BMAds. (B) Volcano plots show the differential genes with padj <0.05 & |Log2 fold change|>1 in comparisons between BMAd-Pnpla2+/+ CR versus ad libitum (AL) (left), BMAd-Pnpla2-/- versus BMAd-Pnpla2+/+ at AL (middle) and BMAd-Pnpla2-/- versus BMAd-Pnpla2+/+ at CR (right). (C-F) Differential genes from comparison between BMAd-Pnpla2+/+ CR versus AL were grouped into 4 clusters according to the alteration patterns. Pathway analyses were performed on each cluster except cluster 2, which gene set was not enriched in any pathways.
Figure 5—figure supplement 2. BMAd-Pnpla2 deficiency causes extensive alterations to the bone marrow transcriptome only when coupled with CR.

Figure 5—figure supplement 2.

Twenty-four weeks old male mice underwent 30% CR for 6 weeks. Distal tibial cBMAT was flushed and cBMAT from two mice were pooled as one sample for RNA sample preparation. High-quality RNA samples were submitted for RNAseq analyses. (A) Pathway analysis of gene set that respond to CR independent of Pnpla2 deficiency in BMAds, indicated by * area. (B) qPCRs were performed to confirm the changes of adipogenesis genes in BMAT. Data are expressed as mean ± SD. * indicates p<0.05 with two-way ANOVA analysis followed by Šídák’s multiple comparisons test. (C-D) Heat maps for genes related to fatty acid biosynthesis (C) and myeloid leukocyte differentiation (D). (E) Collagen genes that upregulated by CR in BMAd-Pnpla2+/+ mice.
Figure 5—figure supplement 2—source data 1. BMAd-Pnpla2 deficiency causes extensive alterations to the bone marrow transcriptome only when coupled with CR.
Figure 5—figure supplement 3. BMAd-Pnpla2 deficiency alters gene expression in response to CR.

Figure 5—figure supplement 3.

Male mice at 24 weeks of age underwent 30% CR for 6 weeks. Distal tibial cBMAT was flushed and cBMAT from two mice were pooled as one sample for RNA sample preparation. High-quality RNA samples were submitted for RNAseq analyses. (A) Differential genes with our criteria (padj <0.05 and |Log2 fold change|>1) between BMAd-Pnpla2-/- CR and BMAd-Pnpla2+/+CR were grouped into three clusters. (B-C) Pathway analyses were performed on cluster 2 (B). Heat maps for genes related to hematopoietic progenitor cell differentiation and positive regulation of osteoblast differentiation (C). (D-E) Pathway analyses were performed on cluster 3 (D). Heat maps for genes related to regulation of lipid catabolic process and leukocyte migration (E).

To evaluate further whether BMAd-Pnpla2 is required for the adaptation of BMAT to CR, we graphically ordered genes from those maximally induced to those most repressed by CR in control mice (Figure 5B; red dots). Of these genes, 66% did not meet our criteria for regulated expression by CR in BMAd-Pnpla2-/- mice (blue dots). Pathway analyses on the 34% of genes regulated by CR regardless of Pnpla2 deficiency revealed association with ribonuclease activity, response to hormones and other transmembrane signaling pathways (Figure 5—figure supplement 2A). Pathway analyses of genes for which Pnpla2 is required for response to CR identified vasculature development and cellular response to growth factor stimulus, similar to cluster 1, followed closely by skeletal system development, adipogenesis genes, and extracellular matrix organization pathways (Figure 5C). A heatmap showed that the adipogenic genes, including Adipoq, Fabp4, Cebpa, Lipe, Lpl, Ppara, Pparg, Scd1, Plin1, Cd36, Fasn, and Acaca, were upregulated by CR in control mice (Figure 5D), a subset of which were confirmed by qPCR (Figure 5—figure supplement 2B). These changes may help to explain molecular mechanisms underlying BMAT expansion following CR. It is important to note that whereas CR BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice had comparable amounts of BMAT (Figure 3—figure supplement 1O and P), adipocyte gene expression was greatly suppressed in mice with BMAT lacking Pnpla2 (Figure 5D). This observation is consistent with prior work showing that adipocyte-specific deletion of Pnpla2 results in decreased expression of genes associated with lipid uptake, synthesis, and adipogenesis (Schoiswohl et al., 2015), perhaps because NEFA and associated metabolites act as PPAR ligands (Mottillo et al., 2012). In addition, genes related to endogenous fatty acid biosynthesis were also increased by CR in BMAd-Pnpla2+/+ mice, but not in mice lacking Pnpla2 (Figure 5—figure supplement 2C). Interestingly, myeloid leukocyte differentiation genes followed a similar pattern (Figure 5—figure supplement 2D), which may contribute to the reduced neutrophil production and impaired myeloid cell proliferation of CR BMAd-Pnpla2-/- mice (Supplementary file 1, Supplementary file 2, and Figure 4).

We previously observed increased bone loss in BMAd-Pnpla2-/- mice challenged with CR (Figure 3). To investigate potential mechanisms underlying this bone loss, we analyzed pathways from Cluster 1 related to bone metabolism, skeletal system development and extracellular matrix organization. Interestingly, osteoblast-derived alkaline phosphatase (Alpl), Col1a1 and Col1a2, and bone marrow Fgf/Fgfr and Wnt signaling-related molecules were highly induced by CR in control mice but not in Pnpla2-deficient mice (Figure 5E); many of these genes are also found in the ossification pathway. Multiple collagen genes, Lox, and Adamts (A Disintegrin and Metalloproteinase with Thrombospondin motifs) family members, which are multidomain extracellular protease enzymes and play key roles in extracellular matrix remodeling, were also upregulated by CR in control mice, with effects largely eliminated by Pnpla2 deficiency (Figure 5F). These findings may partially explain why osteoid thickness tended to be thinner in BMAd-Pnpla2-/- mice (Figure 3K). In this regard, 20 collagen genes were significantly up-regulated in control mice following CR (Figure 5—figure supplement 2E), whereas only four collagen genes were elevated in CR BMAd-Pnpla2-/- mice. Taken together, these data suggest that under conditions of limited dietary energy, BMAds provide energy to maintain osteoblast functions, including the secretion of collagen matrix for osteoid synthesis.

As mentioned above, loss of Pnpla2 in CR mice altered expression of 1060 genes (Figure 5—figure supplement 1B; right), which were clustered into three groups (Figure 5—figure supplement 3A). Cluster 1 included genes that were induced only in CR BMAd-Pnpla2-/- mice. Although not localized to specific pathways, these genes were involved in diverse metabolic and cellular processes (e.g. Perm1, mt-Nd6, and B3gat2), and were generally expressed at low levels at baseline. In contrast, cluster 2 contained genes that were suppressed in CR BMAd-Pnpla2-/- mice, including pathways related to mitochondrial functions, hematopoietic progenitor cell differentiation, positive regulation of osteoblast differentiation and fatty acid biosynthetic process (Figure 5—figure supplement 3B and C), which sheds further light on the impaired HSPC proliferative capacity and osteoblast functions. Genes in cluster 3 were upregulated by CR, but not by CR in the absence of BMAd-Pnpla2. Pathway analyses highlighted the regulation of lipid catabolic process, triacylglyceride synthesis and leukocyte migration (Figure 5—figure supplement 3D and E), consistent with the impaired lipid metabolism and leukocyte production observed in BMAd-Pnpla2-/- mice.

BMAd lipolysis is required for trabecular and cortical bone regeneration

To test whether BMAds are a critical source of local energy under conditions where energy needs are elevated, we investigated the impact of CR and BMAd Pnpla2 deficiency on bone regeneration. To do this, we created a 0.7 mm hole in the proximal tibia, approximately 1–2 mm distal from the growth plate, and evaluated the newly formed woven bone in both the trabecular (endocortical) and cortical compartments nine days later (Figure 6A). As expected, CR impaired formation of bone in the trabecular (endocortical) region of interest (ROI), resulting in decreased bone volume fraction, mineral density, and mineral content (Figure 6B). Importantly, these effects of CR were mimicked by BMAd-specific Pnpla2 deletion; however, gene deletion did not compound effects of CR on impaired bone regeneration, perhaps because newly-formed bone volume was already low with either CR or Pnpla2 deficiency alone. We then visualized newly formed bone in the cortical bone compartment with Safranin O/ Fast Green (SO/FG) staining of paraffin-embedded proximal tibia sections (Figure 6C). Of note, both bone marrow stromal and periosteal cells contribute to the cortical bone regeneration and are derived from common mesenchymal progenitors (Duchamp de Lageneste et al., 2018). Although deficiency of BMAd-lipolysis is unlikely to affect periosteal cell functions when the cortical bone is intact, it may interact with this cell population during bone regeneration. CR also impaired formation of new woven bone in the cortical compartment by decreasing bone volume fraction, mineral density, and mineral content. As with bone formation in the trabecular compartment, effects of CR on the cortical compartment are mimicked by BMAd-specific depletion of Pnpla2, and effects of impaired BMAd lipolysis did not exacerbate CR-induced impaired bone regeneration (Figure 6D). Taken together, these data provide compelling evidence that under conditions where energy requirements are high, BMAd provide a critical local energy source for early-stage bone regeneration.

Figure 6. Energy from BMAd is required for trabecular bone regeneration and protects against bone loss caused by chronic cold exposure.

(A-D) BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- male mice at 24 weeks of age fed with chow diet (-) or underwent 30% CR for six weeks (+). A 0.7 mm proximal tibial defect was created 1–2 mm distal to the growth plate. Tibiae were collected 9 days after surgery. MicroCT was performed to analyze trabecular (endocortical) and cortical bone regeneration. (A) Representative analyzing images of bone defect. Example of μCT showing trabecular (endocortical) region of interest (ROI; green) and cortical ROI (yellow). Newly generated woven bone in trabecular (endocortical; red) and cortical compartment (purple) is indicated. (B) Quantification of regenerated bone in the endocortical compartment - bone volume fraction (BV/TV), mineral density (BMD) and mineral content (BMC). Data are expressed as mean ± SD. (C) Safranin O/ Fast Green (SO/FG) staining of new cortical compartment formation in defect sites. Scale bar; 200 μm. (D) Quantification of regenerated cortical woven bone volume fraction (BV/TV), mineral density (BMD) and mineral content (BMC). (E-I) Female BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice at 20 weeks of age were singly housed at 4°C for three weeks without enrichments. Tibiae were collected for sectioning and μCT analyses. (E) Proximal tibiae were decalcified and paraffin-sectioned for H&E staining. Representative images for proximal tibia are shown. Scale bar, 100 μm. (F-G) Quantification of BMAds from H&E-stained slides using MetaMorph software. Comparison of BMAd size at room temperature (RT) versus cold exposure (CE) in mice of indicated genotypes. (H) Trabecular bone volume fraction (BV/TV) and mineral density (BMD) were quantified by μCT. Data are expressed as mean ± SD. * indicates p<0.05 with two-way ANOVA analyses followed by Šídák’s multiple comparisons test. Significant effects of genotype, diet, or their interactions are shown, as are trends.

Figure 6—source data 1. Energy from BMAd is required for trabecular bone regeneration and protects against bone loss caused by chronic cold exposure.

Figure 6.

Figure 6—figure supplement 1. Energy from BMAd protects against changes in trabecular microstructures caused by chronic cold exposure.

Figure 6—figure supplement 1.

(A-D) Female BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice at 20 weeks of age were singly housed at 4°C for 3 weeks. Tibiae were decalcified for paraffin sectioning. (A) H&E-stained slides were used to quantify osteoblast number (Ob. N) and bone surface (BS). (B-C) TRAP-stained slides were used for osteoclast number (Oc. N) and surface (Oc. S) quantification, which were normalized to BS. (D) Serum P1NP concentrations were measured. (E-J) Male BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice at 17–20 weeks of age were singly housed at 4°C for 3 weeks. Tibiae were collected for μCT analyses. Trabecular bone volume fraction (BV/TV), mineral density (BMD), connective density (Conn. Dens), trabecular thickness (Th), number (N) and separation (Sp) were quantified by μCT. Data are expressed as mean ± SD. * indicates p<0.05 with two-way ANOVA analyses followed by Šídák’s multiple comparisons test. Significant effects of genotype, temperature, or their interactions are shown.
Figure 6—figure supplement 1—source data 1. Energy from BMAd protects against changes in trabecular microstructures caused by chronic cold exposure.

Energy from BMAd protects against bone loss caused by chronic cold exposure

Cold exposure is well-documented to increase energy expenditure and adaptive thermogenesis, largely fueled by energy stored in WAT depots. To explore further under what conditions BMAd lipolysis may be critical for bone cell functions, we first evaluated female control and BMAd-Pnpla2-/- mice, which have higher content of BMAT than males, and housed them at room (22 °C) or cold (4 °C) temperatures for three weeks when they were at 20 weeks of age. As expected (Scheller et al., 2015; Scheller et al., 2019), cold exposure resulted in smaller rBMAds within the proximal tibia of BMAd-Pnpla2+/+ mice (Figure 6E and F). In contrast, rBMAd size was increased at baseline in BMAd-Pnpla2-/- mice, with no reduction observed with cold exposure (Figure 6E and G). These data indicate that intact BMAd lipolysis was required for reduction of BMAd size with cold exposure. We then evaluated bone mass by μCT and found that whereas trabecular bone of the proximal tibia was maintained in BMAd-Pnpla2+/+ mice with cold stress, trabecular bone volume fraction declined with cold exposure in BMAd-Pnpla2-/- mice and bone mineral density showed a similar trend (Figure 6H). These results suggest that lipolysis from vicinal BMAds is important for maintenance of bone when energy needs are high or when energy supply is limited. Histomorphometry analyses did not reveal significant changes in osteoblast and osteoclast numbers, or in TRAP-positive osteoclast surface per bone surface (Figure 6—figure supplement 1A-C). However, the bone formation marker, P1NP, decreased in cold-exposed BMAd-Pnpla2-/- mice compared to room temperature controls (Figure 6—figure supplement 1D), suggesting that osteoblast functions were impaired.

We also evaluated whether BMAT lipolysis is necessary for maintenance of trabecular bone microstructures in male mice under cold exposure conditions (Figure 6—figure supplement 1E-J). Interestingly, control BMAd-Pnpla2+/+ male mice were more vulnerable to cold-induced bone loss than female mice, with significant reductions of trabecular bone volume fraction, mineral density, and thickness. There was no obvious further decrease of these parameters in BMAd-Pnpla2-/- mice, perhaps because bone volume was already low with cold exposure. However, two-way ANOVA analyses revealed there were interactions between temperature and genotype, suggesting there were further changes in BMAd-Pnpla2-/- mice (Figure 6—figure supplement 1E,F,H ). Although cold stimuli did not affect the microstructure parameters of trabecular bone in BMAd-Pnpla2+/+ mice, cold exposure decreased trabecular connective density and trabecular number, and increased trabecular bone spacing in BMAd-Pnpla2-/- mice (Figure 6—figure supplement 1G,I,J and ). Taken together, these data highlight sexual dimorphism in the response of bone to cold, and that in both males and females, a further loss of bone is observed when BMAT lipolysis is impaired.

Discussion

In the current study, we developed and tested for the first time, a BMAd-specific mouse model to more clearly understand the function of bone marrow adipose tissue, particularly during times of nutritional, hormonal, mechanical and environmental stress. Previously, the role of BMAds in the marrow niche was deduced through indirect inferences from associations of skeletal and hematopoietic phenotypes with bone marrow adipose tissue volume. This has been exemplified by a number of BMAT depletion models which showed high bone mass, including A-ZIP (Naveiras et al., 2009), Adipoq-driven DTA (Zou et al., 2019), and Adipoq-driven loss of Pparg (Wang et al., 2013), Lmna (Corsa et al., 2021), or Bscl2 (Mcilroy et al., 2018); however these lipodystrophic mice also lacked white and brown adipose depots and thus exhibit global metabolic dysfunction, including fatty liver, hyperlipidemia and insulin resistance. Moreover, Adipoq-driven Cre used in those studies also causes recombination in bone marrow stromal cells (Mukohira et al., 2019). Similarly, mouse models or treatments that result in BMAT expansion, such as Prx1-driven Pth1r knockout mice (Fan et al., 2017), CR, thiazolidinedione administration, estrogen-deficiency, and irradiation (Li and MacDougald, 2021), also caused bone loss, but again, effects on bone may be secondary to lack of promoter specificity or confounding systemic effects. Lineage tracing studies have previously been performed to determine cell-specific markers for BMAds. For example, both Prx1 and Osterix are restricted to bone and trace to 100% of BMAds, but are also expressed in mesenchymal cells (Logan et al., 2002; Mizoguchi et al., 2014). Nestin and leptin receptor (Lepr) label over 90% of BMAds, but also trace to stromal cells (Zhou et al., 2017). Whereas Pdgf-receptor α (Pdgfrα)-driven Cre expression causes recombination in all white adipocytes, only 50–70% of BMAds are traced (Horowitz et al., 2017). Thus, our successful strategy for targeting BMAds using dual expression of Osterix and Adipoq, as reported in this work, improves the interpretability of experiments on the distinct roles of BMAds in the marrow niche and will be a useful tool for future investigations.

After generating this novel BMAd-specific Cre mouse model, we successfully ablated Pnpla2 in BMAds, and demonstrated the necessity of ATGL in BMAd lipolysis. Our studies directly demonstrate for the first time the importance of BMAd lipolysis in myelopoiesis and bone homeostasis under conditions of energetic stress, including CR, irradiation, bone regeneration and cold exposure. With the loss of peripheral WAT in CR mice, there is a dramatic increase in BMAT throughout the tibia, and this is accompanied by increased expression of adipocyte genes, including those involved in lipid uptake, de novo lipogenesis, and lipolysis. BMAT expansion with CR has been observed in both rodents and humans (Cawthorn et al., 2014; Devlin et al., 2010; Fazeli et al., 2021), and mechanisms underlying this observation are still not fully understood. We speculate that CR promotes lipolysis in peripheral adipose tissues, and the released non-esterified fatty acids have increased flux to bone marrow, where they are used either directly to maintain hematopoiesis and bone homeostasis, or used indirectly after having been stored and released from BMAT. The RNAseq data also suggests that BMAds have elevated rates of lipid uptake, lipogenesis and lipolysis with CR in control mice. However, when BMAd lipolysis is impaired, this dynamic cycle is halted, which is reflected by the blunted induction of adipocyte genes in response to CR. This BMAd quiescence causes a shortfall in local energy supply and contributes to hematopoietic cell and osteoblast dysfunction. In this regard, two major collagens secreted by osteoblasts, Col1a1 and Col1a2, and Alpl were increased by CR in control BMAd-Pnpla2+/+ mice, but not in calorie-restricted BMAd-Pnpla2-/- mice. These data are consistent with the trend for thinner osteoid observed in CR BMAd-Pnpla2-/- mice and reduced circulating concentrations of the bone formation marker P1NP. Although bone mineralization is not impaired, new bone forming surface is reduced in CR mice that lack BMAd lipolysis. In addition, the number of osteoclasts on trabecular bone surface is higher in CR BMAd-Pnpla2-/- mice; however, osteoclast surface per bone surface and a circulating marker of bone turnover (CTX-1) are not increased. A serum marker for osteoclast activity, TRACP5b, is decreased in BMAd-Pnpla2-/- mice either fed ad libitum or a CR diet. Taken together, our studies suggest that bone mass reduction in CR BMAd-Pnpla2-/- mice is less likely due to degradation of bone by osteoclasts, and more likely due to impaired osteoblast function, including collagen secretion and osteoid production.

Interestingly, the contributions of BMAd lipolysis to bone homeostasis appear to be more important in male mice compared to females. Although we considered that a stronger phenotype might be revealed in female mice following estrogen depletion, the low bone mass observed with ovariectomy or CR may represent a critical threshold that is strongly defended through mechanisms independent of BMAd lipolysis. Alternatively, it is possible that androgens increase energy requirements of bone such that male mice are more dependent on BMAd lipolysis under stressful conditions. Consistent with this tenet, in both mouse and human studies of calorie restriction, males tend to have greater induction of BMAds than females (Fazeli et al., 2021). Importantly, we observed that bone volume fraction and trabecular number were increased by 12 weeks of CR in OVX mice of both genotypes, suggesting that the metabolic and anti-aging benefits of CR somehow block the bone loss associated with estrogen deficiency as mice aged to 40 weeks.

Surprisingly, despite expansion of BMAT in ad libitum-fed BMAd-Pnpla2-/- male and female mice, we did not observe differences in skeletal parameters, indicating that expansion of BMAT is not sufficient to cause bone loss, and that the correlation between elevated fracture risk and expansion of BMAT under a variety of clinical situations is not necessarily a causal relationship. The critical role of BMAd lipolysis in fueling osteoblasts was observed in BMAd-Pnpla2-/- male mice only when energy needs were high, or when the availability of dietary energy was low. Of note, cellular protein synthesis typically uses 25–30% of the oxygen consumption coupled to ATP synthesis (Rolfe and Brown, 1997), and this percentage may be higher in osteoblasts since protein synthesis and translation are integral to osteoblast function. Additionally, fatty acids contribute substantially to the energy demands of bone tissue and cells (Adamek et al., 1987), and in the absence of BMAd lipolysis, these energy needs must be met from circulating lipids, glucose, lactate, and amino acids. Uptake of fatty acids by osteoblasts is likely mediated by the CD36 fatty acid translocase, which is required in mice to maintain osteoblast numbers and activity (Kevorkova et al., 2013). Further, impairment of fatty acid oxidation in osteoblasts and osteocytes led to reduced postnatal bone acquisition in female, but not male mice. Interestingly, significant increases in the osteoid thickness, osteoid volume per bone volume, and the osteoid maturation time suggest that a mineralization defect occurs in mice unable to oxidize fatty acids obtained not only from BMAds, but also from circulation (Kim et al., 2017). Although we have largely interpreted effects of Pnpla2 deficiency as causing a local energy shortfall, Pnpla2 deficiency may also alter downstream signaling activities. For example, ATGL deficiency prevents cAMP-dependent degradation of TXNIP and thus reduces glucose uptake and lactate secretion (Beg et al., 2021). ATGL-catalyzed lipolysis also provides essential mediators to increase activity of PGC-1α/PPARα and PPARδpathways (Haemmerle et al., 2011; Khan et al., 2015). Thus, it is conceivable that ATGL deficiency may alter the BMAd transcriptome and secretome to influence the marrow niche independent of its role as a fuel source.

Given the extensive literature describing interactions between BMAds and hematopoietic cells (Lee et al., 2018; Valet et al., 2020), we were surprised at the lack of substantial changes in hematopoietic progenitors, white blood cells, and red blood cells in BMAd-Pnpla2-/- mice under basal and CR conditions. One possibility is that skeletal sites containing low BMAd numbers, including vertebrae, sternum, ribs and pelvis, may allow compensatory formation of circulating mature blood cells (Kricun, 1985). In addition, hematopoietic progenitors and mature blood cell populations were not substantially altered in bone marrow of long bones, with the exception of myeloid differentiation into neutrophils, suggesting that hematopoietic cellularity is generally maintained despite expansion of BMAT volume. Although hematopoietic progenitors and mature cells can use lipids for energy, glucose serves as the major source of energy for glycolysis and oxidative metabolism in these cell populations (Jeon et al., 2020; Roy et al., 2018). It is perhaps unsurprising, given the importance of blood cell production in maintaining life, that there is a great deal of metabolic flexibility when it comes to fuel sources for hematopoiesis. While HSPC numbers are unaltered in our BMAd-Pnpla2-/- mice, myeloid lineage cell recovery is significantly blunted by CR and deficiency of BMAd-lipolysis following sublethal irradiation and in in vitro myeloid CFU assays. Myeloid progenitors from CR BMAd-Pnpla2-/- mice had an impaired capacity to expand, suggesting that progenitors were reprogrammed in response to energy deficiency in the bone marrow niche. We did not profile the metabolic changes of HSPCs in CR BMAd-Pnpla2-/- mice, but it has been reported that fatty acid oxidation is required for HSC asymmetric division to retain the stem cell properties (Ito et al., 2012).

In summary, we have developed a novel mouse model to specifically evaluate the importance of BMAds in adult life and during times of nutritional, hormonal, environmental and mechanical stress. We report that BMAds are a local energy source that support myeloid cell lineage regeneration following irradiation, and maintain progenitor differentiation capacity when systemic energy is limiting. In addition, we find that BMAT serves a highly specialized function to maintain bone mass and osteoblast function in times of elevated local energy needs such as with bone regeneration, increased whole body energy needs from cold exposure, or when dietary energy is limited due to CR. Thus, Steele’s instincts in 1884 when he wrote that fat from marrow 'nourishes the skeleton' are largely borne out by modern experimentation.

Limitations of study

There are some limitations to the BMAd-Cre mice that should be noted. For instance, expression of Cre from the IRES within the 3'-UTR of Adipoq is relatively low, and thus rates of recombination are less frequent in young mice than optimal. Mice that are older than 16 weeks are suggested for future usage of this Cre mouse model. However, bone formation and turnover rates decrease with age both in mice and humans (Fatayerji and Eastell, 1999; Ferguson et al., 2003), which may provide challenges for mechanistic studies. The IRES-Cre cassette also causes hypoadiponectinemia so experimental design must include appropriate controls with BMAd-Cre positive mice with or without floxed genes. Although a total absence of adiponectin reduces bone mass (Naot et al., 2016; Yang et al., 2019; Zhu et al., 2020), mice with hypoadiponectinemia described here did not exhibit metabolic or bone phenotypes. In retrospect, a better approach might have been to accept loss of one Adipoq allele and insert the FAC cassette at the start site of the adiponectin coding region to promote high levels of Cre expression. This strategy might also have allowed inducible knockout of BMAd genes with tamoxifen through expression of CreERT2, which we found to be too inefficient to be functional when inserted into the 3'-UTR of Adipoq, with only 5–8% BMAds labeled in tamoxifen-treated adult mice. Of note, all mice used in these studies were on a mixed SJL and C57BL/6 J background, and mouse strain influences bone mass, and responsiveness of bone to stressors. Although we have not provided direct evidence of BMAd-derived fatty acids fueling osteoblasts or hematopoietic cells, this line of investigation will require technical advances to distinguish BMAd-derived NEFA from those in circulation. It should be noted that our RNAseq data was obtained from cBMAT of distal tibiae. It is likely that the fundamental interactions between BMAT and other cells within the marrow niche are similar between regions; however, we do not exclude the possibility that there may be unique interactions between rBMAT and osteoblast/hematopoietic cells.

Materials and methods

Resource availability

Lead contact

Further information and requests for resources and reagents should be directed to and will be fulfilled by the Lead Contact, Ormond A. MacDougald (https://medicine.umich.edu/dept/molecular-integrative-physiology/ormond-macdougald-phd).

Materials availability

Our Osterix-FLPo and FLPo-dependent Adipoq-Cre (FAC) mouse models will be available to investigators upon request. All the other data and materials that support the findings of this study are available within the article and supplemental information, or available from the authors upon request.

Animal

Generation of BMAd-specific Cre mouse model

To create a BMAd-specific Cre mouse model, we expressed mouse codon-optimized FLP (FLPo) (Raymond et al., 2007) from the Osterix (Sp7) locus to recombine and activate a Cre expressed from the Adipoq locus. After designing sgRNA target sequences against 3’-UTR of endogenous Osterix (sgRNA: gatctgagctgggtagaggaagg) and Adipoq (sgRNA1: tgaacaagtgagtacacgtgtgg; sgRNA2: cagtgagcagaaaaatagcatgg) genes with the prediction algorithm available at http://crispor.tefor.net, we cloned sgRNA sequences into an expression plasmid bearing both sgRNA scaffold backbone (BB) and Cas9, pSpCas9(BB) (Ran et al., 2013), which is also known as pX330 (Addgene plasmid ID: 42230; Watertown, MA). Modified pX330 plasmids were injected into fertilized ova. After culture to the blastocyst stage, Cas9 activity was confirmed by sequencing the predicted cut site. We then inserted a DNA fragment containing an in-frame fusion protein between endogenous Osterix and FLPo, separated by coding sequence for P2A (porcine teschoviral-1) self-cleavage site to allow the full-length proteins to function independently. We also inserted into the 3'-UTR of Adipoq an IRES-F3-Frt-reversed Cre-F3-Frt cassette with ~1 kb of 5’ and 3’ flanking homology-arm sequence. The targeting vectors (Cas9 expression plasmid: 5 ng/ul; donor DNA: 10 ng/ul) were injected into fertilized mouse eggs, which were transferred into pseudopregnant recipients to obtain pups. Tail DNA was obtained for genomic PCR and Sanger sequencing to screen F0 founders for desired genetic modifications at the expected locations. These F0 generation chimeric mice were mated with normal mice to obtain mice that are derived exclusively from the modified fertilized eggs. Germline transmitted mice (F1 generation) carrying the designated genetic modifications were bred with reporter mice to validate the activity and efficiency of FLPo and Cre recombinase. These mice were generated by University of Michigan Transgenic Animal Model Core and MDRC Molecular Genetics Core.

Validation of Osterix-FLPo specificity and efficiency

Osterix-FLPo mice were bred with FLP-dependent EGFP reporter mice (derived from https://www.jax.org/strain/012429; Bar Harbor, ME), provided by Dr. David Olson from the University of Michigan MDRC Molecular Genetics Core. Fresh tissue confocal was performed to validate EGFP expression.

Validation of the specificity and efficiency of FLPo-activated Adipoq-Cre (FAC) mice

Among 80 F0 generation pups, 13 mice carried the FAC cassette. These founder mice were bred with Osterix-FLPo mice and mT/mG reporter mice (Stock No. 007676, Jackson Laboratory; Bar Harbor, ME) to further validate Cre recombinase activity and specificity via fresh tissue confocal and immunofluorescent histology. Every single mouse in F1 generation was confirmed and separated for future breeding. We finally selected F0-#693→ F1-#4376 for BMAd-specific knockout lines. Of note, Osterix-FLPo and FAC mice were generated on a mixed SJL and C57BL/6J background. Pnpla2flox/flox mice purchased from Jackson laboratory (Stock No. 024278; Bar Harbor, ME) were on a C57BL/6J background.

Animal housing

Mice were housed in a 12 hr light/dark cycle in the Unit for Laboratory Animal Medicine at the University of Michigan, with free access to water. Mice were fed ad libitum or underwent caloric restriction, as indicated. All procedures were approved by the University of Michigan Committee on the Use and Care of Animals with the protocol number as PRO00009687.

Animal procedures

  1. 30% CR. After acclimation to single-housing for 2 weeks, and control diet (D17110202; Research Diets; New Brunswick, NJ) for a week, daily food intake was measured for another week. Mice were then fed a 30% CR diet (D19051601; Research Diets; New Brunswick, NJ) daily at ~6 pm, prior to onset of the dark cycle.

  2. Ovariectomy. Female mice at 16 weeks of age underwent ovariectomy (OVX). After 2 weeks recovery, they were either fed an ad libitum or 30% CR diet for 12 weeks.

  3. Proximal tibial defect. Surgeries were performed under isoflurane anesthesia, and subcutaneous 0.1 mg/kg buprenorphine was given in 12 h intervals for peri-/post-operative pain management. The proximal tibial defects were obtained by drilling a hole through anterior cortical and trabecular bone, 1–2 mm below the epiphyseal growth plate, with a 0.7 mm low-speed drill.

  4. Cold exposure. Mice were single-housed without nesting materials in thermal chambers for 3 weeks at 4°C.

  5. Glucose Tolerance Test (GTT). Mice were fasted overnight (16–18 hours). Body weight and fasting glucose levels were measured, followed by an intraperitoneal (i.p.) injection of glucose (1 g glucose/kg body weight). Blood glucose was measured with Bayer Contour test strips at 15, 30, 60, 90, and 120 min time points by cutting the tip of tails.

  6. Whole body irradiation. Irradiations were carried out using a Kimtron IC320 (Kimtron Medical; Oxford, CT) at a dose rate of ~4 Gy/min with total dosage of 6 Gy in the University of Michigan Rogel Cancer Center Experimental Irradiation Shared Resource. Dosimetry was carried out using an ionization chamber connected to an electrometer system that is directly traceable to a National Institute of Standards and Technology calibration.

Fresh tissue confocal microscopy

Osterix-driven EGFP expression and BMAd-Cre-driven mT/mG reporter mice were sacrificed. Fresh tissues were collected immediately and put in ice-cold PBS, which was protected from light. Soft tissues including adipose tissues and liver were cut into small pieces and placed in a chamber for confocal imaging (Nikon Ti-E Inverted Microscope; Minato City, Tokyo, Japan). Bones were bisected and butterflied on a coverslip for imaging. Both white field and fluorescent images were taken under ×200 magnification.

Histology and histomorphometry

Tissue histology was performed essentially as described previously (Li et al., 2019). Briefly, soft tissues were fixed in formalin, and embedded in paraffin for sectioning. Tibiae were fixed in paraformaldehyde, decalcified in EDTA for at least 2 weeks, and followed by post-decalcification fixation with 4% paraformaldehyde. Bone tissues were then embedded in paraffin, sectioned. After staining with hematoxylin and eosin (H&E), soft tissues were imaged with an Olympus BX51 microscope. Bones were stained with H&E or Tartrate-Resistant Acid Phosphatase (TRAP; Sigma-Aldrich, MO) as indicated, and slides were scanned at ×200 magnification. Static measurements include bone volume fraction, trabecular bone microstructure parameters, osteoblast number and surface, and osteoclast number and eroded surface. Undecalcified tibia was used for plastic sectioning. Mineralized trabecular bone and osteoid were evaluated with Goldner’s Trichrome Staining. For dynamic studies, calcein (C0857; Sigma-Aldrich, MO) dissolved in 0.02 g/ml sodium bicarbonate with 0.9% saline at 20 mg/kg was injected intraperitoneally nine- and two-days before sacrifice for quantification of mineral surface (MS), inter-label width (Ir. L. Wi), and mineral apposition rate (MAR) in tibia. Calculations were made with Bioquant Osteo 2014 (Nashville, TN) software in a blinded manner (Merceron et al., 2014; Morse et al., 2014).

μCT analysis

Tibiae were placed in a 19-mm diameter specimen holder and scanned over the entire length of the tibiae using a μCT system (μCT100 Scanco Medical, Bassersdorf, Switzerland). Scan settings were: voxel size 12 µm, 70 kVp, 114 µA, 0.5 mm AL filter, and integration time 500ms. Density measurements were calibrated to the manufacturer’s hydroxyapatite phantom. Analysis was performed using the manufacturer’s evaluation software with a threshold of 180 for trabecular bone and 280 for cortical bone.

Marrow fat quantification by osmium tetroxide staining and μCT

After analyses of bone variables, mouse tibiae were decalcified for osmium tetroxide staining, using our previously published method (Scheller et al., 2015). In addition, a lower threshold (300 grey-scale units) was used for proximal tibial rBMAT quantification because density of osmium staining is low due to smaller adipocyte size, and with threshold as 400 grey-scale units for cBMAT in distal tibia.

Immunofluorescent staining

Decalcified tibiae were embedded in OCT compound and used for frozen sectioning at 15 μm. Excess OCT was removed, and tibial tissues were blocked with 10% goat serum for one hour at room temperature. Primary antibodies for GFP (1:500) and RFP (1:200; Figure 1F) or ATGL (1:100; Figure 2B) were then added to slides and incubated with bone tissues overnight at 4°C. Secondary antibodies (goat anti-Rabbit IgG, Alexa Fluor 594 and goat anti-chicken IgG Alexa Fluor 488 or donkey anti-rabbit IgG (H+L), Alexa Fluor 488) were added to slides following three washes. Two hours later, DAPI staining was performed. Slides were mounted with prolong gold antifade reagent and imaged.

RNA extraction and quantitative real-time PCR (qPCR)

RNA was extracted from tissues after powdering in liquid nitrogen and lysis in RNAStat60 reagent in a pre-cooled dounce homogenizer. Quantitative PCR was performed using an Applied Biosystems QuantStudio 3 qPCR machine (Waltham, MA). Gene expression was calculated based on a cDNA standard curve within each plate and normalized to expression of the geometric mean of housekeeping genes Hprt, Rpl32A, and Tbp. qPCR primers are provided in Supplementary file 3.

Immunoblot

Detection of proteins by immunoblot was as described previously (Mori et al., 2021).

Ex vivo lipolysis

Distal tibial BMAT plugs were flushed out from the bone, and four plugs were pooled into one well of a 96-well plate for each n. Pre-warmed 2% BSA HBSS was added to BMAT explants with vehicle (DMSO) or forskolin (FSK, 5 μM), to activate lipolysis (Litosch et al., 1982). Cultured media was collected hourly for 4 hr, and glycerol and NEFA concentrations were measured with commercially available kits as listed above in reagents.

CFU assay

Bone marrow cells of BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice were obtained from femur and tibia. To isolate bone marrow, the bones were flushed with IMDM (Gibco 12440; Waltham, MA) containing penicillin-streptomycin antibiotic (Gibco 15270–063; Waltham, MA). Pelleted cells were counted with a hemocytometer, 1 × 104 cells were plated in Methocult medium (Stem cell M3534; Vancouver, Canada) in 35 mm culture dishes, and cells were then incubated at 37°C in 5% CO2 with ≥95% humidity for seven days. CFU-G, CFU-M and CFU-GM colonies on each plate were counted using a microscope with a 4X objective lense.

Bulk RNA sequencing

Distal tibial plugs (cBMAT) from two animals were pooled together for each bulk RNAseq sample. Total RNA was isolated from BMAT for strand specific mRNA sequencing (Beijing Genomics Institute, China). Over twenty million reads were obtained using a paired-end 100 bp module on DNBSEQ platform. The quality of the raw reads data was checked using FastQC (v.0.11.9) and the filtered reads were aligned to reference genome (UCSC mm10) using STAR with default parameters. All samples passed the post-alignment quality check (QualiMap v.2.2.1). The DEseq2 method was used for differential expression analysis with genotype (Pnpla2+/+ vs. Pnpla2-/-) and treatment (CR vs. ad libitum) as the main effects. Gene ontology analysis was done using MetaScape. The Principal Component Analysis (PCA) plot was generated using the PlotPCA function building in DESeq2 package. To compare the number of differentially expressed genes between genotype/treatment groups, volcano plots were constructed using the Enhanced Volcano package under R environment. Heatmap plots were generated using pheatmap package under R environment and the complete-linkage clustering method was used for the hierarchical cluster of genes. These data are available through NCBI GEO with the following accession number, GSE183784.

Flow cytometry

Femurs were isolated from mice. Bone marrow was harvested by flushing the femurs with 1 mL of ice-cold PEB (1 X PBS with 2 mM EDTA and 0.5% bovine serum albumin). Red blood cells were lysed once by adding 1 mL of RBC Lysis Buffer (155 mM NH4Cl, 10 mM KHCO3, 0.1 mM EDTA) and gently pipetting to mix. Cells were immediately pelleted by centrifugation and resuspended in 1 mL of ice-cold PEB. Cells were stained for 30 min in PEB buffer with the indicated antibodies below and analyzed on the BD LSRFortessa or BD FACSAria III. Data was analyzed using FlowJo software (BD Biosciences, version 10.8). Dead cells and doublets were excluded based on FSC and SSC distribution. To stain for mature leukocytes antibodies used were against CD45, Ly6G, CD11b, CD115, CD19, and CD3e. All CD45+ cells were gated first for further identification. Neutrophils were defined as Ly6G+CD11b+, monocytes were defined as Ly6G-CD11b+CD115+, B cells were defined as Ly6G-CD11b-CD19+, and T cells were defined as Ly6G-CD11b-CD3e+. To stain for bone marrow neutrophil populations, antibodies used were against Ly6G, CD11b, cKit, CXCR2, CXCR4, and CD62L. Pre-neutrophils were defined as Ly6G+CD11b+cKit+, immature neutrophils were defined as Ly6G+CD11b+cKit-CXCR2lo, and mature neutrophils were defined as Ly6G+CD11b+cKit-CXCR2hi. To stain for hematopoietic stem and progenitor cells (HSPCs) antibodies used were against a lineage panel (Gr-1, CD11b, B220, CD3e, TER119), cKit, Sca-1, CD150, CD48, CD105, and CD16/32. After gating on the lineage- population, HSPCs were defined as follows; HSCs as LSKCD150+CD48-, MPPs as LSKCD150-CD48-, HPC1 as LSKCD150-CD48+, HPC2 as LSKCD150+CD48+, GMPs as LKCD150-CD16/32+, PreGMs as LKCD150-CD105-, PreMegEs as LKCD150+CD105-, and PreCFUe as LKCD150+CD105+. LSK = lineage-Sca1+cKit+, LK = lineage-cKit+.

Bone regeneration analysis

Nine days after the proximal tibial defect surgery, proximal tibiae were collected for μCT scanning. After construction, new generated trabecular and cortical bone were quantified by Dragonfly software (Montréal, Canada). Under the full view of 3D and 2D images, a cylinder-shaped region of interest (ROI) was defined in trabecular or cortical bone defect area (as shown in Figure 6A) with 3D dimension as 0.3 mm (diameter) x 0.7 mm (height) for trabecular compartment and 0.3 mm (diameter) x 0.2 mm (height) for cortical compartment. An automatic split at otsu threshold for each bone was collect first, and then mean threshold for a whole cohort was calculated. This average threshold was applied to each bone to normalize bone volume fraction and mineral content.

Statistics

We calculated the minimal animal number required for studies based on the mean and SD values to make sure we had adequate animals per group to address our hypothesis. All the mice were randomly assigned to the indicated groups. Although the investigators responsible for group allocation were not blinded to the allocation scheme, they were blinded to group allocation during data collection, and the investigators responsible for analyses were blinded to the allocation scheme.

Significant differences between groups were assessed using a two-sample t-test or ANOVA with post-tests as appropriate: one-way ANOVA with Tukey’s multiple comparisons test, two-way ANOVA with Sidak’s multiple comparisons test, and three-way ANOVA analysis as appropriate. All analyses were conducted using the GraphPad Prism version 9. All graphical presentations are mean +/-SD. For statistical comparisons, a p-value of <0.05 was considered significant. All experiments were repeated at least twice.

Acknowledgements

This work was supported by grants or fellowships from the NIH to OAM (R01 DK62876; R24 DK092759; R01 DK126230; R01 AG069795), SMR (T32 GM835326; F31 DK12272301), DPB (T32 HD007505; T32 GM007863), KS (R01DK115583), KTL (T32 DK071212; F32 DK122654), RLS (T32 DK101357; F32 DK123887), KDH (R01AR066028), and CJR (R24DK092759). ZL was supported by a fellowship from the American Diabetes Association (1–18-PDF-087) and EB from the American Heart Association (20-PAF00361). This research was also supported by a Pilot & Feasibility grant and core facilities of the Michigan Integrative Musculoskeletal Health Core Center (P30 AR069620), Michigan Diabetes Research Center (P30 DK020572), Michigan Nutrition and Obesity Center (P30 DK089503), and University of Michigan Comprehensive Cancer Center (P30 CA046592).

Appendix 1

Appendix 1—key resources table.

Reagent type (species) or resource Designation Source or reference Identifiers Additional information
Strain, strain background (Mus musculus, SJLxC57BL/6J) Osterix-FLPo Generated in University of Michigan Transgenic Animal Model Core Donated to JAX:
Stock No. 037208
Male and female
Strain, strain background (Mus musculus, SJLxC57BL/6J) FLPo-dependent Adipoq-Cre (FAC) Generated in University of Michigan Transgenic Animal Model Core N/A Male and female
Strain, strain background (Mus musculus, SJLxC57BL/6J) Frt-floxed EGFP Generated in University of Michigan Transgenic Animal Model Core N/A Male and female
Strain, strain background (Mus musculus, C57BL/6J) mT/mG Jackson Laboratory Stock No. 007676 Male and female
Strain, strain background (Mus musculus, C57BL/6J) Pnpla2 flox/flox Jackson Laboratory Stock No. 024278 Male and female
Antibody Anti-Adiponectin
(rabbit monoclonal)
Sigma-Aldrich A6354 WB (1:1000)
Antibody Anti-FABP4/A-FABP Antibody
(goat polyclonal)
R&D Systems AF1443 WB (1:1000)
Antibody Anti-alpha Tubulin Antibody
(rat monoclonal)
Thermo Fisher Scientific MA180017 WB (1:1000)
Antibody Anti-ERK 2 Antibody (mouse monoclonal) Santa Cruz Biotechnology sc-1647 WB (1:1000)
Antibody Anti-Albumin antibody
(rabbit monoclonal)
Abcam Ab207327 WB (1:1000)
Antibody Anti-ATGL Antibody
(rabbit polyclonal)
Cell Signaling Technology 2138S WB (1:1000)
Antibody Anti-ATGL Antibody
(rabbit monoclonal)
Abcam ab207799 IF (1:100)
Antibody Anti-GFP antibody
(chicken polyclonal)
Abcam ab13970 IF (1:500)
Antibody Anti-RFP Antibody Pre-adsorbed
(rabbit polyclonal)
Rockland 600-401-379 IF (1:200)
Antibody Goat anti Rabbit IgG (H+L) Secondary Antibody, Alexa Fluor 594 (goat polyclonal) Invitrogen A11012 IF (1:100)
Antibody Alexa Fluor 488 goat anti-chicken IgG (H+L) (goat polyclonal) Invitrogen A11039 IF (1:100)
Antibody Anti-Ly6G FITC
(rat monoclonal)
BD Biosciences 551460 FACS (1:200)
Antibody Anti-CD11b APC
(rat monoclonal)
Invitrogen 17-0112-82 FACS (1:200)
Antibody Anti-CD115 APC-Cy7
(rat monoclonal)
Biolegend 135531 FACS (1:100)
Antibody Anti-CD3e PE-Cy7
(Armenian Hamster monoclonal)
Biolegend 100319 FACS (1:200)
Antibody Anti-CD19 Pacific Blue
(rat monoclonal)
Invitrogen 48-0193-82 FACS (1:200)
Antibody Anti-CD45 AlexaFluor700
(rat monoclonal)
BD Biosciences 560510 FACS (1:200)
Antibody Anti-Gr-1 Biotin
(rat monoclonal)
Biolegend 79750 FACS (1:200)
Antibody Anti-CD11b Biotin
(rat monoclonal)
Biolegend 79749 FACS (1:200)
Antibody Anti-B220 Biotin
(rat monoclonal)
Biolegend 79752 FACS (1:200)
Antibody Anti-CD3e Biotin
(Armenian Hamster monoclonal)
Biolegend 79751 FACS (1:200)
Antibody Anti-TER119 Biotin
(Armenian Hamster monoclonal)
Biolegend 79748 FACS (1:200)
Antibody Anti-Sca1 PE-Cy7
(rat monoclonal)
Invitrogen 25-5981-82 FACS (1:200)
Antibody Anti-cKit (CD117) APC-Cy7
(rat monoclonal)
Biolegend 105826 FACS (1:100)
Antibody Anti-CD150 BrilliantViolet 421
(rat monoclonal)
Biolegend 115925 FACS (1:200)
Antibody Anti-CD48 FITC
(Armenian Hamster monoclonal)
Invitrogen 11-0481-85 FACS (1:100)
Antibody Anti-CD16/32 PerCP-Cy5.5
(rat monoclonal)
Biolegend 101324 FACS (1:200)
Antibody Anti-CD105 APC
(rat monoclonal)
Biolegend 120413 FACS (1:200)
Antibody Anti-CXCR2 PE
(rat monoclonal)
Biolegend 149304 FACS (1:200)
Antibody Anti-CXCR4 PE-Dazzle
(rat monoclonal)
Biolegend 146514 FACS (1:100)
Antibody Anti-CD62L BrilliantViolet 421
(rat monoclonal)
Biolegend 104435 FACS (1:200)
Commercial assay or kit Acid Phosphatase Leukocyte (TRAP) Kit Sigma-Aldrich 387A-1KT
Commercial assay or kit Free Glycerol Determination Kit Sigma-Aldrich FG0100
Commercial assay or kit NEFA Reagent (NEFA-HR(2)) FUJIFILM Wako Diagnostics NC9517309
Commercial assay or kit BCA Protein Assay Kit Thermo Fisher Scientific 23225
Commercial assay or kit RAT/MOUSE P1NP ELISA KIT Immunodiagnostic Systems Inc NC9666468
Commercial assay or kit Mouse TRANCE/RANK L/TNFSF11 Quantikine ELISA Kit R&D Systems MTR00
Commercial assay or kit MOUSE TRAP ASSAY Immunodiagnostic Systems Inc NC9360739
Commercial assay or kit MethoCult GF M3534 ATEMCELL 03534
Commercial assay or kit DNA-free Kit Life Technologies AM1906
Chemical compound, drug Calcein Sigma-Aldrich C0875
Chemical compound, drug EDTA DOT Scientific Inc dse57020
Chemical compound, drug Tetroxide Osmium Electron Microscopy Sciences 19190
Chemical compound, drug Forskolin Cayman Chemical Company 11018
Chemical compound, drug Bovine Serum Albumin (BSA), Fraction V Gold Biotechnology A-421–250
Chemical compound, drug qPCRBio SyGreen Mix Hi-ROX Blue Innovative Solutions 4SPB20.16
Chemical compound, drug PCRBio HS Taq Mix Red Innovative Solutions 4SPB10.23
Chemical compound, drug Agarose Thermo Fisher Scientific BP160-500
Chemical compound, drug RNA STAT-60 AMSBIO CS-502
Chemical compound, drug M-MLV Reverse Transcriptase Thermo Fisher Scientific 28025013
Chemical compound, drug 100bp DNA Ladder NEB N3231S
Software, algorithm Microsoft Office Microsoft https://its.umich.edu/communication/collaboration/microsoft-office-365/getting-started
Software, algorithm Adobe photoshop Adobe https://www.adobe.com/creativecloud/desktop-app.html
Software, algorithm Prism 9 GraphPad software https://www.graphpad.com/
Software, algorithm Image J Image J https://imagej.nih.gov/ij/
Software, algorithm MetaMorph BioVision Technologies https://www.biovis.com/metamorph.html
Software, algorithm Scano μCT 100 SCANCO Medical AG https://www.scanco.ch/
Software, algorithm BIOQUANT OSTEO BIOQUANT Image analysis corporation https://bioquant.com/
Software, algorithm STAR PMID:23104886 https://github.com/alexdobin/STAR;
Dobin et al., 2013; Dobin, 2022
Software, algorithm DESeq2 PMID:25516281 https://bioconductor.org/packages/release/bioc/html/DESeq2.html
Software, algorithm QualiMap-2 PMID:26428292 https://qualimap.conesalab.org
Software, algorithm R The R Foundation https://www.r-project.org/
Software, algorithm Metascape PMID:30944313 https://metascape.org/gp/index.html
Software, algorithm Dragonfly ORS - OBJECT RESEARCH SYSTEMS https://www.theobjects.com/dragonfly/index.html
Software, algorithm FlowJo BD Biosciences https://www.flowjo.com/solutions/flowjo
Other Streptavidin BrilliantViolet 510 Biolegend 405233 FACS (1:200)
Other Element HT5 Veterinary Hematology Analyzer Heska https://www.heska.com/product/element-ht5/ Service provided by UMICH In-Vivo Animal Core (IVAC)
Other FACSAria III cell sorter BD Biosciences N/A Shared equipment in UMICH Flow Cytometry Core
Other LSRFortessa Cell Analyzer BD Biosciences N/A Shared equipment in UMICH Flow Cytometry Core
Other Nikon A1 Confocal Microscope Nikon N/A Shared equipment in UMICH Microscopy and Imaging Analysis Core (MIAC) Michigan Diabetes Research Center
Other Bayer Contour Next Test Glucose Strips Diabetic Corner ByrContournext https://www.contournextone.com/siteassets/pdf/web85688006_cntrnxtone_ug_r01-17.pdf
Other Scanco μCT 100 micro-computed tomography system SCANCO Medical AG https://www.scanco.ch/ Service provided by UMICH School of Dentistry MicroCT Core
Other Olympus BX51 Olympus N/A https://www.olympus-lifescience.com/en/microscope-resource/primer/techniques/fluorescence/bx51fluorescence/
Other StepOnePlus Real-Time PCR System Thermo Fisher Scientific 4376600 https://www.thermofisher.com/order/catalog/product/4376600
Other Microtome Leica RM2235 https://www.leicabiosystems.com/en-br/histology-equipment/microtomes/leica-rm2235/
Other Slide scanner Nikon N/A Shared equipment in UMICH Orthopaedic Research Laboratories (ORL) Histology Core

Funding Statement

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.

Contributor Information

Ormond A MacDougald, Email: macdouga@umich.edu.

Mone Zaidi, Icahn School of Medicine at Mount Sinai, United States.

Mone Zaidi, Icahn School of Medicine at Mount Sinai, United States.

Funding Information

This paper was supported by the following grants:

  • National Institutes of Health R01 DK62876 to Ormond A MacDougald.

  • National Institutes of Health R24 DK092759 to Ormond A MacDougald.

  • National Institutes of Health R01 DK126230 to Ormond A MacDougald.

  • National Institutes of Health R01 AG069795 to Ormond A MacDougald.

  • National Institutes of Health T32 GM835326 to Steven M Romanelli.

  • National Institutes of Health F31 DK12272301 to Steven M Romanelli.

  • National Institutes of Health T32 HD007505 to Devika P Bagchi.

  • National Institutes of Health T32 GM007863 to Devika P Bagchi.

  • National Institutes of Health R01DK115583 to Kanakadurga Singer.

  • National Institutes of Health T32 DK071212 to Kenneth T Lewis.

  • National Institutes of Health F32 DK122654 to Kenneth T Lewis.

  • National Institutes of Health T32 DK101357 to Rebecca L Schill.

  • National Institutes of Health F32 DK123887 to Rebecca L Schill.

  • National Institutes of Health R01AR066028 to Kurt D Hankenson.

  • National Institutes of Health R24DK092759 to Clifford J Rosen.

  • American Diabetes Association 1-18-PDF-087 to Ziru Li.

  • American Heart Association 20-PAF00361 to Emily Bowers.

Additional information

Competing interests

No competing interests declared.

No competing interests declared.

Author contributions

Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Software, Validation, Visualization, Writing - original draft.

Data curation, Formal analysis, Investigation, Methodology, Resources, Software, Visualization.

Data curation, Investigation, Methodology, Resources, Visualization.

Data curation, Formal analysis, Methodology, Resources, Software, Visualization.

Data curation, Investigation, Visualization.

Investigation.

Investigation.

Investigation.

Investigation.

Investigation.

Investigation.

Data curation, Methodology.

Conceptualization, Funding acquisition, Methodology, Resources, Supervision, Writing – review and editing.

Conceptualization, Funding acquisition, Methodology, Resources, Supervision, Writing – review and editing.

Conceptualization, Funding acquisition, Project administration, Resources, Supervision, Writing – review and editing.

Conceptualization, Data curation, Funding acquisition, Project administration, Resources, Supervision, Writing – review and editing.

Ethics

All procedures were approved by the University of Michigan Committee on the Use and Care of Animals with the protocol number as PRO00009687.

Additional files

Supplementary file 1. BMAd-lipolysis deficiency has subtle effects on circulating mature blood cells.

Whole blood from male mice at 24 weeks of age fed ad libitum (top) or a 30% CR diet for 6weeks (bottom) was submitted for complete blood counts (CBC). White- and red- blood cell related parameters are shown. Multiple unpaired t tests had been performed crossing all parameters, P values were adjusted for multiple comparisons using Two-stage step-up (Benjamini, Krieger, and Yekutieli) with FDR method.

elife-78496-supp1.docx (27.7KB, docx)
Supplementary file 2. BMAd-lipolysis deficiency causes mild changes in bone marrow hematopoietic cells.

Femoral bone marrow cells from male mice at 24 weeks of age fed ad libitum (top) or a 30% CR diet for 6 weeks (bottom) were collected and stained with antibodies for flow cytometry analyses. Mature blood cells and hematopoietic stem/progenitor cells (HSPCs) were counted. Multiple unpaired t tests had been performed crossing all parameters, P values were adjusted for multiple comparisons using Two-stage step-up (Benjamini, Krieger, and Yekutieli) with FDR method.

elife-78496-supp2.docx (30.4KB, docx)
Supplementary file 3. PCR primer list.
elife-78496-supp3.docx (15.7KB, docx)
MDAR checklist

Data availability

The accession number for the BMAT bulk RNA seq data reported in this paper is GEO: GSE183784.

The following dataset was generated:

Li Z, Yu H, MacDougald O. 2021. Bone marrow adipocyte (BMAd)-specific deletion of Pnpla2 reveals local roles for lipolysis to fuel cells of bone and the marrow niche. NCBI Gene Expression Omnibus. GSE183784

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Editor's evaluation

Mone Zaidi 1

Through the cell selective deletion in bone marrow marrow adipocytes (BMAds) of an enzyme for lipolysis, the authors demonstrate elegantly a role for this pathway in the maintenance of hematopoiesis and bone mass during periods of caloric stress, injury and energy restriction. This study establishes for the first time a role for the bone marrow adipocyte in energy balance.

Decision letter

Editor: Mone Zaidi1
Reviewed by: William P Cawthorn2

Our editorial process produces two outputs: (i) public reviews designed to be posted alongside the preprint for the benefit of readers; (ii) feedback on the manuscript for the authors, including requests for revisions, shown below. We also include an acceptance summary that explains what the editors found interesting or important about the work.

Decision letter after peer review:

Thank you for submitting your article "Lipolysis of bone marrow adipocytes is required to fuel bone and the marrow niche during energy deficits" for consideration by eLife. Your article has been reviewed by 3 peer reviewers, and the evaluation has been overseen by me. The following individual involved in the review of your submission has agreed to reveal their identity: William P Cawthorn (Reviewer #3).

In view of our discussions as a consultative review group, I have drafted this to help you prepare a revised submission.

Essential revisions:

Overall, the work is of high quality. The development of the new mouse model is a major strength that could be transformative for mechanistic studies of BMAd formation and function.

1. A main requirement is to measure circulating adiponectin in experimental mice. If the KO CR mice have lower adiponectin than the WT CR mice then this might be confounding the phenotypes observed. This will need discussion.

2. Many of the current figures and data analysis should also be updated to address limitations mentioned in the reviewer comments (below).

3. Update the statistical analysis so that the authors are not missing genotype*diet interactions, and present the AL and CR data side by side in all relevant figures (e.g. Figure 3, Figure 3 —figure supplement 1, Figure 3 —figure supplement 2). This should be easy to do, though the updated analyses might lead to updated conclusions.

4. Further analyze transcriptomic data for potential clues about the mechanisms underlying the hematological phenotypes (as they've done currently for the bone phenotype). Also highlight the limitation that the transcriptomic data are from distal tibia, whereas the bone analyses and hematological analyses are largely from other regions of the skeleton.

5. Update the OVX analyses to compare the OVX mice with ovary-intact females (as done for uterus masses in Figure 3 —figure supplement 4D). This would partially address the limitation, highlighted by Reviewer 2, that the authors haven't included appropriate sham or estrogen-replete controls for OVX mice. This limitation should be mentioned in the Discussion. Alternatively, the OVX experiment could be removed from the paper, as it is not particularly adding much.

6. Need a proper description and discussion of the bone injury healing experiment.

7. Specific comments under Recommendations to Authors need to be addressed in a point-to-point rebuttal.

Reviewer #1 (Recommendations for the authors):

Overall this is a good manuscript and no major revisions are recommended. However, there are several grammatical errors (e.g. line 521) that would require a careful proofreading to improve. Moreover, given the general readership of eLife, expansion of the introduction to include more background on topics that as written are fairly field-specific would certainly enhance the overall appeal to a wider audience.

Reviewer #2 (Recommendations for the authors):

1) Consider the mechanism by which ATGL deficiency induces lipogenesis with respect to the following. There is a substantial accumulation of marrow fat in Pnpla2 -/- females under CR conditions which supersedes an amount of fat in control mice in the same conditions. This indicates massive lipogenesis rather than BMAd acting as a sink to circulating FA, as the authors propose.

2) To assess whether estrogen protects female Pnpla2 -/- mice from negative effects of CR, mice were OVX. Surprisingly, OVX control and Pnpla2 -/- females "gained" bone when exposed to CR. There is no plausible explanation for this effect, which is in striking contrast to the CR effect in males. In addition, Sham-operated control is not provided in this experiment which poses the question of whether it is a bone gain or protection from bone loss. The conclusion that "metabolic benefits of CR diet combat detrimental effects of estrogen deficiency and/or aging" is overstated and applies only to females. This is an intriguing observation but needs more insight. What is its relevance to humans? Is there any evidence that malnourished postmenopausal women are gaining bone?

3) Pnpla2 -/- male but not female mice have mildly affected myelopoiesis which is exacerbated in CR conditions. CR also affected hematopoietic marrow regeneration after irradiation which correlated with decreased number of hematopoietic stem cells. There is no evidence that these alterations are due to fuel deficiency in the marrow environment. The possibility that there are changes in the signaling milieu should be tested experimentally or considered based on transcriptomic data.

4) In regard to the bone regeneration model there is some misunderstanding. What the authors consider as trabecular bone is actually woven bone that is removed during the final stages of healing which occur at week 4 after injury. Referring to it as trabecular bone is not correct because the woven bone has a different origin and structure. In this model, day 9 after injury correlates with initiation of mineralization which robustness depends on previously formed hematoma and callus, and penetration of new vessels. It is possible that Pnpla2 deficiency affects early stages of bone healing not necessarily osteoblast bone-forming activity. Again, the transcriptomic data may give some clue, although they are done on marrow fat isolated from the distal tibia which is considered metabolically different than marrow fat in the proximal tibia where the bone defect was created.

Reviewer #3 (Recommendations for the authors):

General points:

a. Adiponectin deficiency in the Pnpla2 WT vs KO mice:

Please analyse circulating adiponectin in the Pnpla2 WT vs KO mice. This is important because you show that the BMAd-Cre mice have lower adiponectin and that the KO CR mice do not increase BMAT adiponectin expression to the same extent as the WT CR mice (i.e. Figure 5D and Figure 5 supplemental figure 2B) Notably, adiponectin KO mice have been shown to resist bone loss and BMAT expansion during CR (Zhu et al., 2020). Therefore, if the KO CR mice do have lower adiponectin than the WT CR mice then this might be influencing their bone phenotype. It would also be helpful to know if the BMAd-Cre mice do increase circulating adiponectin during CR, despite having lower adiponectin expression than the non-Cre mice.

Because the hypoadiponectinaemia may be confounding, it would be helpful to compare the BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice with Cre-negative Pnpla2-fl/fl mice, both under AL and CR conditions.

Related to these considerations, in lines 576-578 you mention a few previous studies of adiponectin and bone, but the Zhu 2020 paper about adiponectin KO and CR is not cited. Please update this part of the discussion to mention this very relevant paper.

b. Analysis of diet and diet-genotype effects:

i. In Figure 3 and its supplemental figures 1 and 2 please can the data from ad libitum (AL) mice be analysed together with the data from the calorie-restricted (CR) mice? Currently the two diets are assessed separately and therefore it's not possible to detect effects of CR or if the BMAd Pnpla2 KO significantly alters these diet effects. Knowing this would be extremely informative as it may be that, while the KO alone has no effect within each diet, it might alter the CR effects. For some readouts this may also increase statistical power to detect significant effects of diet or genotype alone.

ii. Related to this, in Figure 3 (supplemental figures 3 and 4), Figure 4 (and its two supplemental figures), Figure 5 (supplemental figure 2B) and Figure 6 the four genotype-diet groups are analysed side-by-side, but they are compared using 1-way ANOVA. For these figures using a 2-way (or sometimes 3-way) ANOVA is more appropriate and, as above, is required if you are to detect diet effects and genotype-diet interactions. For example, the time course data in Figure 4 supplemental figure 1C-E should be assessed by 3-way ANOVA with genotype, diet and time as the independent variables, while the data in Figure 4 and panels F-G of the supplemental figure should be assessed by 2-way ANOVA with genotype and diet as the independent variables. As above, this is important because you can then test for interactions between the variables, which might reveal KO effects that cannot be detected by 1-way ANOVA. In some cases, the 2-way ANOVA is also required to support existing statements in the results. For example, Line 303 ("…mature neutrophils are affected only by CR (Figure 4H)") and Lines 307-308 ("fewer granulocyte progenitor colonies (CFU-G) from CR BMAd-Pnpla2-/- mice (Figure 4I)") are not supported by any statistical analysis.

c. In the Results section the findings frequently are described in the present tense. Convention is to report the results in the past tense (i.e. what was found) and then, in the Discussion, to interpret these data in the present tense (i.e. what the results show/reveal etc). Please can this be updated throughout the Results section?

d. Genotypes of BMAd-Cre mice:

i. In Supplemental Figure 2, you distinguish homozygous vs heterozygous BMAd-Cre mice. I think it would help the reader to clarify that this relates to the FAC transgene, but it's not clear if these mice have one or two alleles of the Osterix-FLPo transgene. Please can you clarify in the text of the results

ii. Lines 174-175: You state that mice used for the Pnpla2 KO studies were positive for both Osterix-FLPo and FAC; were they homozygous for both transgenes or was one of the heterozygous (etc)? This needs to be clarified in the text.

Specific points:

e. Figure 1 —figure supplement 1:

i. For 1C I'm confused by the genotype labelling for the Osterix mouse above the blot: does the '+' refer to the presence of FLPo? It's confusing as usually '+' would refer to the WT allele; please clarify in the figure and the legend.

ii. In the main text (lines 126-128) you state, "Cre in the correct orientation… is only observed in caudal vertebral DNA of mice positive for at least one copy each of Osterix (Mut band) and FAC (Ori band)". This is shown in Supp Figure 1F so please refer to this figure after making this statement in the text. Also, it is logical to move Supp Figure 1F to Supp Figure 1D, as it follows immediately from 1C.

f. Lines 144-145, "Indeed, Cre efficiency is ~80% in both male and female mice over 16 weeks of age with one Cre allele, and over 90% at 12 weeks of age in mice with two Cre alleles". Please explain how you calculated these percentages of efficiency; no quantification is shown in the figures.

g. Lines 160-161: Please can you reword this text for clarity, e.g. "We found that insertion of the IRES-Cre cassette caused a small, non-significant decrease in Adipoq mRNA expression in whole caudal vertebrae or distal tibiae (Figure Supp 2A), whereas Adipoq mRNA in WAT…"

h. Line 166: The greater decrease in circulating adiponectin is clear from the data. Therefore, please revise the wording to "Circulating adiponectin concentrations were decreased even further…".

i. Figure 1 —figure supplement 2F: please can you refer to this in the figure legend, e.g. "(F) High, medium and low molecular weight forms of adiponectin were quantified by Image J."

j. Figure 2

i. 2B: There is still some ATGL fluorescence in the proximal tibia of the KO mice. Where is this coming from? Perhaps ATGL is expressed earlier than adiponectin in BMAd development, so some differentiating BMAds may still have intact ATGL expression?

ii. 2D-F: The differences look greatest in the proximal tibial diaphysis, above the tibia-fibula junction. Is there a reason that this region was not quantified by osmium?

k. Lines 220-222, "These data also indicate that expansion of BMAT is not sufficient to cause bone loss and that the correlation between elevated fracture risk and expansion of BMAT under a variety of clinical situations is not necessarily a causal relationship." This is an interesting and important point but is better suited to the Discussion section.

l. Figure 3 (main figure and Supplemental figures):

i. Figure 3 Supp 1B vs 1K: Was glucose tolerance improved by CR? Fasting and peak glucose in the CR mice (1K) look similar to in the ad libitum mice (1B). It would be informative to calculate the AUC for the GTTs and to then plot this for all four groups on the same axis, comparing by 2-way ANOVA.

ii. In Figure 3 Supp 1O you show nicely that total BMAT volume is similar between KO and control during CR. Is BMAd size the same? i.e. do the KO mice still have larger BMAds than control mice during CR?

iii. Lines 243-244: You state "we observed a trend (P = 0.07) towards reduced NEFA concentrations in bone marrow supernatant of CR BMAd-Pnpla2-/- mice". However, the same trend seems to occur for the AL mice (Supplemental 3I). Please can you add P values to Figure 3 Supp 1I so that the AL data can be compared more directly with glycerol and NEFA during CR (Figure 3 Supp 1R)? Better still would be to have all four groups compared on a single axis (as suggested above in General Point b), as this may give you sufficient power to detect a significant genotype effect on NEFA in the BM supernatant.

iv. In line 255 you state that TRACP5b is decreased but from the figure this isn't significant, so please temper this statement in the main text. Alternatively, if you were to analyse the AL and CR mice together by 2-way ANOVA you might then have enough power to detect a significant decrease in the KO mice, irrespective of diet.

m. Was DAPI used for live/dead staining in your flow cytometry? This is not absolutely essential but should be stated in the Methods section if this was or was not done.

n. Table 2: Please confirm that these P values are adjusted for multiple comparisons and update the Table legend to state how statistical significance was determined.

o. Figure 3 —figure supplement 3:

i. BM adiposity is shown histologically in panel C but this is not quantified, so it's not clear to what extent this is altered by genotype and/or diet. Please can you quantify BM adiposity from these images? Even better would be to use osmium staining so that the female data could be compared with the male data in Figure 3 supplement 1.

p. In Figure 5B-C and the related supplemental figures, what's the rationale for comparing CR KO mice to AL WT mice? I think this comparison is invalid because it is being made across two independent variables. For example, if the target gene expression is similar in CR WT vs CR KO, but (e.g.) lower in AL WT vs AL KO, then the fold change vs AL WT will be similar for CR WT and CR KO, but the fold change for CR KO vs AL KO will be greater. To my mind, this would mean that the KO is altering the effect of CR, but your approach would not detect this. So, if the goal is to identify genes regulated by CR irrespective of Pnpla2 deficiency then this should be done by comparing the effects of CR within each genotype.

q. The finding of impaired bone regeneration with CR and Pnpla2 KO is consistent with your conclusion, i.e. that BMAd lipolysis is important for bone regeneration. However, another interpretation relates to the findings of Ambrosi 2017, who show that BMAds impair fracture healing (Ambrosi et al., 2017). Their data suggest that BMAds can secrete DPP4 and that this impairs bone healing. Therefore, another possibility for your observation is that increased BMAT in the Pnpla2 KO mice results in increased production of DPP4 in the bone marrow, which impairs bone regeneration. Please can you measure DPP4 expression within the BM and/or discuss this possibility in the Discussion section?

r. Line 453: Please correct 'Figure 4I' to 'Figure 4H'. Also, you can't really state that BMD declines when this effect is not statistically significant; can you test this further (e.g. use 2-way ANOVA and/or in a second cohort of mice), or at least temper the language used to describe this effect?

s. You show that myelopoiesis is impaired by BMAd-specific Pnpla2 deficiency, but do not go into the mechanism about why only the myeloid system, and not the CLP or HSC (which are also in the bone marrow), is dependent on energy supply from BMAds under CR. Please can you speculate on this in the Discussion?

References

Ambrosi, T.H., Scialdone, A., Graja, A., Gohlke, S., Jank, A.M., Bocian, C., Woelk, L., Fan, H., Logan, D.W., Schurmann, A., et al. (2017). Adipocyte Accumulation in the Bone Marrow during Obesity and Aging Impairs Stem Cell-Based Hematopoietic and Bone Regeneration. Cell Stem Cell 20, 771-784 e776. 10.1016/j.stem.2017.02.009.

Zhu, J., Liu, C., Jia, J., Zhang, C., Yuan, W., Leng, H., Xu, Y., and Song, C. (2020). Short-term caloric restriction induced bone loss in both axial and appendicular bones by increasing adiponectin. Ann. N. Y. Acad. Sci. n/a. 10.1111/nyas.14380.

eLife. 2022 Jun 22;11:e78496. doi: 10.7554/eLife.78496.sa2

Author response


Essential revisions:

Overall, the work is of high quality. The development of the new mouse model is a major strength that could be transformative for mechanistic studies of BMAd formation and function.

1. A main requirement is to measure circulating adiponectin in experimental mice. If the KO CR mice have lower adiponectin than the WT CR mice then this might be confounding the phenotypes observed. This will need discussion.

We have measured circulating adiponectin concentrations and reported the data in Figure 3 —figure supplement 1V. Although BMAd-Cre mice have hypoadiponectinemia, they still respond to caloric restriction by increasing circulating adiponectin concentrations. Circulating concentrations of adiponectin at baseline and with CR are similar between BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice.

2. Many of the current figures and data analysis should also be updated to address limitations mentioned in the reviewer comments (below).

We have gone through all the datasets and finished the multiple comparisons with FDR method for Figure 3, Tables 1 and 2; and two-way or three-way ANOVA analyses when appropriate for other figures.

3. Update the statistical analysis so that the authors are not missing genotype*diet interactions, and present the AL and CR data side by side in all relevant figures (e.g. Figure 3, Figure 3 —figure supplement 1, Figure 3 —figure supplement 2). This should be easy to do, though the updated analyses might lead to updated conclusions.

Thanks for the suggestion to perform statistical evaluation of main effects and interactions. The significant differences and trends are now reported throughout the figures in the main text and supplements. We have also provided the full statistical analyses in the Source data of Figure 2, Figure 3, Figure 3 —figure supplement 3, Figure 3 —figure supplement 4, Figure 4, Figure 4 —figure supplement 1, Figure 5 —figure supplement 2, Figure 6, Figure 6 —figure supplement 1.

4. Further analyze transcriptomic data for potential clues about the mechanisms underlying the hematological phenotypes (as they've done currently for the bone phenotype). Also highlight the limitation that the transcriptomic data are from distal tibia, whereas the bone analyses and hematological analyses are largely from other regions of the skeleton.

Thank you for encouraging us to dig deeper into the datasets. First, as shown in Figure 5 —figure supplement 2D, we observed that a gene cluster related to “Myeloid leukocyte differentiation” was largely upregulated in CR BMAd-Pnpla2+/+ mice; however, these increases were largely eliminated in CR BMAd-Pnpla2-/- mice. Second, secretory protein analyses revealed that genes related to "hematopoietic stem cell proliferation" followed a similar pattern that was upregulated by CR in control mice, but not in CR BMAd-Pnpla2-deficient mice (Author response image 1) . Third, by comparing gene expression in BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice under AL and CR conditions, we found that the “hematopoietic progenitor cell differentiation pathway” was suppressed only in CR BMAd-Pnpla2-/- mice, whereas expression of “leukocyte migration pathway” genes was increased in CR BMAd-Pnpla2+/+ mice, but not in CR BMAd-Pnpla2-/- mice (New Figure 5 —figure supplement 3).

Author response image 1. BMAd-Pnpla2 deficiency causes alterations in secretory protein gene expression.

Author response image 1.

A. Differential genes regulated by CR in BMAd-Pnpla2+/+ mice were mapped with two independent secretome datasets: MetaZSecKB and VerSaDa. B. Overlapping genes between two secretome datasets were used for pathway analyses. . Z-Scores of genes enriched in hematopoietic stem cell proliferation pathway.

To address differences in where samples were taken for analyses, we have added to the limitation section of the discussion: “It should be noted that our RNAseq data was obtained from cBMAT of distal tibiae. It is likely that the fundamental interactions between BMAT and other cells within the marrow niche are similar between regions; however, we do not exclude the possibility that there may be unique interactions between rBMAT and osteoblast/hematopoietic cells.”

5. Update the OVX analyses to compare the OVX mice with ovary-intact females (as done for uterus masses in Figure 3 —figure supplement 4D). This would partially address the limitation, highlighted by Reviewer 2, that the authors haven't included appropriate sham or estrogen-replete controls for OVX mice. This limitation should be mentioned in the Discussion. Alternatively, the OVX experiment could be removed from the paper, as it is not particularly adding much.

Since there were already four groups in this cohort, it was challenging to add the ovary-intact females, which would have doubled the number of transgenic mice within the experiment. However, we had evaluated a sex- and age-matched female cohort and to provide context to our OVX data, we have now included these data as a control group in Figure 3 —figure supplement 4. Although these data are included as a reference, they are not included in the statistical analyses because they are from an independent cohort.

6. Need a proper description and discussion of the bone injury healing experiment.

We have modified the description of bone healing experiments with help from Dr. Kurt Hankenson, who has considerable experience in this area of research.

Reviewer #1 (Recommendations for the authors):

Overall this is a good manuscript and no major revisions are recommended. However, there are several grammatical errors (e.g. line 521) that would require a careful proofreading to improve. Moreover, given the general readership of eLife, expansion of the introduction to include more background on topics that as written are fairly field-specific would certainly enhance the overall appeal to a wider audience.

We have gone through the whole manuscript carefully, and hope that the grammatical errors are corrected. Thank you for suggesting we add background for a broader audience. We have now provided an overview to adipocytes and bone marrow adipose tissue (BMAT) at the beginning of the introduction, as well as historical context underlying our current investigation.

Reviewer #2 (Recommendations for the authors):

1) Consider the mechanism by which ATGL deficiency induces lipogenesis with respect to the following. There is a substantial accumulation of marrow fat in Pnpla2 -/- females under CR conditions which supersedes an amount of fat in control mice in the same conditions. This indicates massive lipogenesis rather than BMAd acting as a sink to circulating FA, as the authors propose.

We have now quantified the female data and included it in Figure 3 —figure supplement 3C. Male control mice have elevated BMAT that closely matches that in AL and CR BMAd-Pnpla2-/- mice. However, as noted by the reviewer, the female CR BMAd-Pnpla2-/- mice have more rBMAT than CR control mice, and more than AL BMAd-Pnpla2-/- mice. Thus, BMAT increases with CR and/or pnpla2-deficiency in female mice. These observations highlight an underlying theme within this paper – that male and female mice differ in the physiology of the marrow niche. The basis for expansion of BMAT under these conditions is under active investigation within the field, including our lab. For increased number of BMAds, the mechanisms include increased adipogenesis and reduced dedifferentiation. For expanded size of adipocytes, the possibilities include increased de novo lipogenesis, increased uptake and storage of lipid, and impaired lipolysis. Although we did not profile gene expression in female mice, based on the RNAseq data from male mice, the adipogenesis/lipogenesis genes were dramatically increased in Pnpla2+/+ mice under CR conditions, whereas this effect was largely blocked in Pnpla2-/- mice. Thus, it seems unlikely that the elevated number/size of adipocytes in CR BMAd-Pnpla2-/- mice is due to increased storage of fat, but is instead due to an impairment of turnover. Dr. Philipp Scherer has shown quite convincingly that adipocytes of mammary gland and skin have a cycle of differentiation/dedifferentiation and as suggested in the original manuscript (Wang et al., 2018), this phenomenon may be also occurring in bone marrow given how the adipocytes ‘disappear’ with pregnancy and lactation (Honda et al., 2000), with GCSF administration (Li et al., 2019), and with hemolytic anemia (Weiss, 1965). However, lineage tracing of BMAds is challenging because of the high signal in stromal cells observed with inducible Adiponectin-based Cre or rtTA systems. Although these approaches label essentially 100% of adipocytes in white and brown depots, they are not completely penetrant to bone marrow adipose tissue, even with tamoxifen treatments over a long time (30 days). Thus, we will need to make technical breakthroughs before we can really understand the mechanism for expansion of BMAds under these conditions.

2) To assess whether estrogen protects female Pnpla2 -/- mice from negative effects of CR, mice were OVX. Surprisingly, OVX control and Pnpla2 -/- females "gained" bone when exposed to CR. There is no plausible explanation for this effect, which is in striking contrast to the CR effect in males. In addition, Sham-operated control is not provided in this experiment which poses the question of whether it is a bone gain or protection from bone loss. The conclusion that "metabolic benefits of CR diet combat detrimental effects of estrogen deficiency and/or aging" is overstated and applies only to females. This is an intriguing observation but needs more insight. What is its relevance to humans? Is there any evidence that malnourished postmenopausal women are gaining bone?

Thank you for raising this question and its translational significance. We initially were puzzled by our finding of increased trabecular bone during calorie restriction. But a closer look at the transcriptomics and a recent paper by one of our co-authors provides support for this novel observation. First, we noted that by pathway analysis skeletal system development was one of the top 3 gene networks up-regulated in the BMAd-Pnpla2+/+ mice but not the BMAd-Pnpla2-/- mice undergoing 30% calorie restriction. Similarly extracellular matrix organization was also another up-regulated pathway. These responses were somewhat surprising since adipogenesis was the predominant cellular phenotype in the marrow. However, a closer look revealed that regulation of the cellular response to growth factor stimulus was another highly up-regulated network, implying there is an overall recruitment of progenitor cell populations in the niche, including pre-osteoblasts (Figure 5). In support of that tenet, unpublished studies from the Dr. Clifford Rosen’s laboratory have shown that marrow stromal cells from 30% calorie-deficient B6 male and female mice in vitro have enhanced numbers of CFU-Fs, and greater staining of alkaline phosphatase compared to ad libitum MSCs. This was further reinforced by our finding in males that markers of that population, Pth1r, Fgf2, Alpl and Cola1 were all up regulated with 30% CR in the BMAd-Pnpla2+/+ but not the BMAd-Pnpla2-/- mice (Figure 5D-5F).

Our female study in Figure 3 —figure supplement 4 is complicated by the three variables we evaluated (OVX, diet and genotype). As suggested by reviewer 3, we went back and evaluated our data using two-way ANOVA, and in Figure 3 —figure supplement 3D, we observe that CR also increases bone volume fraction and decreases trabecular bone separation in ovary-intact female mice. Note that CR was for 12 weeks and was initiated when female mice were 16 weeks of age. We have reviewed previously the variable response to CR depending on mouse age and sex (Li and MacDougald, 2021).

In terms of the sham control groups, as mentioned above in the response to the editor: Since there were already four groups in this OVX cohort, it was challenging to add the ovary-intact females, which would have doubled the number of transgenic mice within the experiment. However, we had evaluated a sex- and age-matched female cohort and to provide context to our OVX data, we have now included these data as a control group in Figure 3 —figure supplement 4. Although these data are included as a reference, they are not included in the statistical analyses because they are from an independent cohort.

In respect to the translational significance of this work, recent findings from Fazeli et al. and Bredella et al. by our co-author Rosen (Bredella et al., 2022; Fazeli et al., 2021), demonstrated similar results to our mouse work. In that study of 23 human volunteers (mean age 33) who underwent first a high calorie diet (HCD) for ten days, and then after a two-week interval, 10 days of fasting, the increase in marrow adiposity was much more marked with fasting than with overnutrition, and male volunteers exhibited a much more consistent increase in BMAT than females. Moreover, when bone micro-architecture was measured by microCT at both the distal radius and tibia, trabecular bone volume fraction, trabecular thickness and trabecular plate thickness were all significantly increased with fasting compared to baseline measures (p<0.009). In contrast, no significant changes were noted with over-nutrition.

In response to the particular reviewer query, there is no evidence clinically that malnourished post-menopausal women gain bone with calorie restriction; indeed, over a longer period of time, it is likely that they could lose bone. For example, in the CALERIE study of human volunteers 25% calorie restriction over two years led to bone loss at three skeletal sites in both males and females (Villareal et al., 2016). Furthermore, Beavers et al. have shown in older women in the absence of estrogen that dietary restriction also causes bone loss (Wherry et al., 2021). Taken together our data suggest that short term calorie restriction in adult female mice increases trabecular bone mass due to an increase in recruitment of osteoblast progenitors that can make collagen. However, we postulate that longer term loss of energy (comparable to a human 10 day fast), as shown in the above noted human studies, would ultimately lead to bone loss, particularly in states of estrogen deficiency. The translational importance of our findings relates to the skeletal complications of long-term dietary manipulations. For example, intermittent fasting is now touted as a major weight-loss strategy, yet we know little about its impact on the skeleton, particularly in postmenopausal women. In fact, skeletal responses to intermittent fasting is the subject of a recently submitted R01 since it is clear that a better understanding of the molecular cellular and hormonal response in the marrow to dietary changes is needed.

3) Pnpla2 -/- male but not female mice have mildly affected myelopoiesis which is exacerbated in CR conditions. CR also affected hematopoietic marrow regeneration after irradiation which correlated with decreased number of hematopoietic stem cells. There is no evidence that these alterations are due to fuel deficiency in the marrow environment. The possibility that there are changes in the signaling milieu should be tested experimentally or considered based on transcriptomic data.

Thank you for raising this important caveat. We have added the following section to the discussion. “Although we have largely interpreted effects of Pnpla2 deficiency as causing a local energy shortfall, Pnpla2 deficiency may also alter downstream signaling activities. For example, ATGL deficiency prevents cAMP-dependent degradation of TXNIP and thus reduces glucose uptake and lactate secretion (Beg et al., 2021). ATGL-catalyzed lipolysis also provides essential mediators to increase activity of PGC-1α/PPARα and PPARd pathways (Haemmerle et al., 2011; Khan et al., 2015). Thus, it is conceivable that ATGL deficiency may alter the BMAd transcriptome and secretome to influence the marrow niche independent of its direct role as a fuel source.” Further we have added this sentence to the limitations section: “Although we have not provided direct evidence of BMAd-derived fatty acids fueling osteoblasts or hematopoietic cells, this line of investigation will require technical advances to distinguish BMAd-derived NEFA from those in circulation.”

We also appreciate your suggestion to analyze our RNAseq data to reveal possible mechanisms of impaired myelopoiesis. First, as shown in Figure 5 —figure supplement 2D, we found that gene expression related to “Myeloid leukocyte differentiation” was upregulated in CR BMAd-Pnpla2+/+ mice; however, these increases were largely eliminated in BMAd-Pnpla2-/- mice. Second, interactions between BMAds and osteoblast/hematopoietic cells may be paracrine in nature; thus, we further mapped the RNAseq data with two independent secretome databases: MetaZSecKB (Meinken et al., 2015) and VerSaDa (Cortazar et al., 2017). Among the 1026 genes that were upregulated by CR in BMAd-Pnpla2+/+ mice, 88 were identified as highly likely secreted proteins in the MetaZSecKB database, whereas 69 genes encoding secreted proteins were identified by the VerSaDa database (Author response image 1A) . Furthermore, we aligned the secretory proteins from these two independent databases and found 45 genes were shared, which were used for pathway analyses. Again, “extracellular matrix (ECM) organization” and “ECM-receptor interaction” were ranked as the top two pathways (Author response image 1B). Interestingly, “hematopoietic stem cell proliferation pathway” was enriched for a number of genes, including Sfrp2, which was reported as an important factor for maintaining the HSC pool (Ruf et al., 2016); Thpo, which influences hematopoietic recovery after myeloablative stress (Gao et al., 2021); and Prg4, which is required for stimulating effects of parathyroid hormone on HSPCs (Novince et al., 2011). Z-Scores showed that Sfrp2, Thpo and Prg4 were upregulated in CR BMAd-Pnpla2+/+ mice, effects of which were largely eliminated by the deficiency of Pnpla2 in BMAd (Author response image 1C). Third, further analyses of the differentially-regulated genes between CR BMAd-Pnpla2+/+ and CR BMAd-Pnpla2-/- mice revealed that “hematopoietic progenitor cell differentiation pathway” was suppressed only in CR BMAd-Pnpla2-/- mice, whereas “leukocyte migration pathway” was activated in CR BMAd-Pnpla2+/+ mice, but inhibited in CR BMAd-Pnpla2-/- mice (New Figure 5 —figure supplement 3).

4) In regard to the bone regeneration model there is some misunderstanding. What the authors consider as trabecular bone is actually woven bone that is removed during the final stages of healing which occur at week 4 after injury. Referring to it as trabecular bone is not correct because the woven bone has a different origin and structure. In this model, day 9 after injury correlates with initiation of mineralization which robustness depends on previously formed hematoma and callus, and penetration of new vessels. It is possible that Pnpla2 deficiency affects early stages of bone healing not necessarily osteoblast bone-forming activity. Again, the transcriptomic data may give some clue, although they are done on marrow fat isolated from the distal tibia which is considered metabolically different than marrow fat in the proximal tibia where the bone defect was created.

We appreciate your professional insights and apologize for mis-characterizing the injury response. We have corrected the description of bone regeneration with the help from Dr. Kurt Hankenson, who is an expert in bone healing field. As shown in Figure 5C, genes in vasculature development, skeletal system development, extracellular matrix organization and ossification pathways are upregulated by CR in in BMAd-Pnpla2+/+ mice, but these pathways are inhibited in in CR BMAd-Pnpla2-/- mice. The limitation of site-specific effects has been highlighted, although larger transgenic animals will be required to collect enough proximal tibial regulated BMAT to reveal the possible site-specific effects.

Reviewer #3 (Recommendations for the authors):

General points:

a. Adiponectin deficiency in the Pnpla2 WT vs KO mice:

Please analyse circulating adiponectin in the Pnpla2 WT vs KO mice. This is important because you show that the BMAd-Cre mice have lower adiponectin and that the KO CR mice do not increase BMAT adiponectin expression to the same extent as the WT CR mice (i.e. Figure 5D and Figure 5 supplemental figure 2B) Notably, adiponectin KO mice have been shown to resist bone loss and BMAT expansion during CR (Zhu et al., 2020). Therefore, if the KO CR mice do have lower adiponectin than the WT CR mice then this might be influencing their bone phenotype. It would also be helpful to know if the BMAd-Cre mice do increase circulating adiponectin during CR, despite having lower adiponectin expression than the non-Cre mice.

Because the hypoadiponectinaemia may be confounding, it would be helpful to compare the BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice with Cre-negative Pnpla2-fl/fl mice, both under AL and CR conditions.

We have measured circulating adiponectin concentrations and reported the data in Figure 3 —figure supplement 1V. Although BMAd-Cre mice have hypoadiponectinemia, they still respond to caloric restriction by increasing circulating adiponectin concentrations. Circulating concentrations of adiponectin at baseline and with CR are similar in BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice. Because we noticed the BMAd-Cre, per se, caused hypoadiponectinemia, all animal used for experiments were BMAd-Cre positive mice, therefore unfortunately, we don’t have any non-Cre mice with CR treatment.

Related to these considerations, in lines 576-578 you mention a few previous studies of adiponectin and bone, but the Zhu 2020 paper about adiponectin KO and CR is not cited. Please update this part of the discussion to mention this very relevant paper.

Thanks a lot for the reference. It is cited in our manuscript.

b. Analysis of diet and diet-genotype effects:

i. In Figure 3 and its supplemental figures 1 and 2 please can the data from ad libitum (AL) mice be analysed together with the data from the calorie-restricted (CR) mice? Currently the two diets are assessed separately and therefore it's not possible to detect effects of CR or if the BMAd Pnpla2 KO significantly alters these diet effects. Knowing this would be extremely informative as it may be that, while the KO alone has no effect within each diet, it might alter the CR effects. For some readouts this may also increase statistical power to detect significant effects of diet or genotype alone.

Our AL and CR cohorts were performed independently; we are cautious to directly combine them to present in the paper. As shown in Author response image 2, with the two-way ANOVA analysis after combining AL and CR cohorts together, the conclusions are not changed. We don’t observe an interaction between diet and genotype either.

Author response image 2. BMAd lipolysis is required to maintain bone homeostasis in male mice under conditions of CR, but not when mice are fed ad libitum.

Author response image 2.

ii. Related to this, in Figure 3 (supplemental figures 3 and 4), Figure 4 (and its two supplemental figures), Figure 5 (supplemental figure 2B) and Figure 6 the four genotype-diet groups are analysed side-by-side, but they are compared using 1-way ANOVA. For these figures using a 2-way (or sometimes 3-way) ANOVA is more appropriate and, as above, is required if you are to detect diet effects and genotype-diet interactions. For example, the time course data in Figure 4 supplemental figure 1C-E should be assessed by 3-way ANOVA with genotype, diet and time as the independent variables, while the data in Figure 4 and panels F-G of the supplemental figure should be assessed by 2-way ANOVA with genotype and diet as the independent variables. As above, this is important because you can then test for interactions between the variables, which might reveal KO effects that cannot be detected by 1-way ANOVA. In some cases, the 2-way ANOVA is also required to support existing statements in the results. For example, Line 303 ("…mature neutrophils are affected only by CR (Figure 4H)") and Lines 307-308 ("fewer granulocyte progenitor colonies (CFU-G) from CR BMAd-Pnpla2-/- mice (Figure 4I)") are not supported by any statistical analysis.

Original data of Figure 3 (and its supplemental figures 3 and 4), Figure 4 (and its supplemental figure 1), Figure 5 (and its supplemental figure 2B) and Figure 6 (and its supplemental figure 1), all the four genotype-diet groups have been analyzed with two-way or three-way ANOVA accordingly. Conclusions have been updated and the analytic data are included in the source data excel file. To address the two specific contexts you mention: we now have included the statement that “The recovery of neutrophils, preneutrophils, immature and mature neutrophils following irradiation was impaired by CR, and Pnpla2-deficiency further reduced ability of neutrophils and mature neutrophils to regenerate (Figure 4 E-4H).” For Figure 4I, no statistical differences were observed, thus we softened our statement for CR BMAd-Pnpla2 -/- mice to “a trend of fewer…”.

c. In the Results section the findings frequently are described in the present tense. Convention is to report the results in the past tense (i.e. what was found) and then, in the Discussion, to interpret these data in the present tense (i.e. what the results show/reveal etc). Please can this be updated throughout the Results section?

We appreciate the reviewer’s suggestions for writing. The tenses have been changed throughout the manuscript.

d. Genotypes of BMAd-Cre mice:

i. In Supplemental Figure 2, you distinguish homozygous vs heterozygous BMAd-Cre mice. I think it would help the reader to clarify that this relates to the FAC transgene, but it's not clear if these mice have one or two alleles of the Osterix-FLPo transgene. Please can you clarify in the text of the results.

We don’t observe any differences in the FLPo efficiency between one or two alleles. We also did not notice any metabolic or bone growth phenotype (Author response image 3) . Thus, cohorts were generally homozygous for Osterix-FLPo with a minority of mice being heterozygous.

Author response image 3. Phenotypes of Osterix-FLPo wild type, heterozygous and homozygous mice.

Author response image 3.

Osterix-FLPo mice were euthanized at 24 weeks of age. GTT was performed at 22 weeks of age (A). Body weights, tissue weights and bone lengths were measured during dissection (B-I). Tibiae were collected for mCT analyses; trabecular (J-O) and cortical bone (P-Q) parameters were measured.

ii. Lines 174-175: You state that mice used for the Pnpla2 KO studies were positive for both Osterix-FLPo and FAC; were they homozygous for both transgenes or was one of the heterozygous (etc)? This needs to be clarified in the text.

We have now stated that “To minimize variability between treatments, all mice used in the following studies were positive for both Osterix-FLPo (predominately two alleles) and FAC (mostly two alleles).

Specific points:

e. Figure 1 —figure supplement 1:

i. For 1C I'm confused by the genotype labelling for the Osterix mouse above the blot: does the '+' refer to the presence of FLPo? It's confusing as usually '+' would refer to the WT allele; please clarify in the figure and the legend.

Apologies for the confusion. “+” indicates the presence of FLPo or FAC (insertion), which has been clarified in the legend.

ii. In the main text (lines 126-128) you state, "Cre in the correct orientation… is only observed in caudal vertebral DNA of mice positive for at least one copy each of Osterix (Mut band) and FAC (Ori band)". This is shown in Supp Figure 1F so please refer to this figure after making this statement in the text. Also, it is logical to move Supp Figure 1F to Supp Figure 1D, as it follows immediately from 1C.

We have referred Supp Figure 1F in the text and adjusted the order of panels according to reviewer’s suggestion

f. Lines 144-145, "Indeed, Cre efficiency is ~80% in both male and female mice over 16 weeks of age with one Cre allele, and over 90% at 12 weeks of age in mice with two Cre alleles". Please explain how you calculated these percentages of efficiency; no quantification is shown in the figures.

We have now rigorously quantified the data based on red versus green BMAds in BMAd-mTmG mice. The EGFP+ cell percentages are included in Figure 1—figure supplement 1I.

g. Lines 160-161: Please can you reword this text for clarity, e.g. "We found that insertion of the IRES-Cre cassette caused a small, non-significant decrease in Adipoq mRNA expression in whole caudal vertebrae or distal tibiae (Figure Supp 2A), whereas Adipoq mRNA in WAT…"

Reworded as reviewer suggested.

h. Line 166: The greater decrease in circulating adiponectin is clear from the data. Therefore, please revise the wording to "Circulating adiponectin concentrations were decreased even further…".

Reworded as reviewer suggested.

i. Figure 1 —figure supplement 2F: please can you refer to this in the figure legend, e.g. "(F) High, medium and low molecular weight forms of adiponectin were quantified by Image J."

Thanks for the careful reading. “(F)” is added.

j. Figure 2

i. 2B: There is still some ATGL fluorescence in the proximal tibia of the KO mice. Where is this coming from? Perhaps ATGL is expressed earlier than adiponectin in BMAd development, so some differentiating BMAds may still have intact ATGL expression?

Sorry for the dirty background. The remaining fluorescence is mostly between cells, which may be due to the insufficient washing after staining.

ii. 2D-F: The differences look greatest in the proximal tibial diaphysis, above the tibia-fibula junction. Is there a reason that this region was not quantified by osmium?

The region between growth plate and tibia/fibula junction was quantified as shown in Author response image 4. It was not included in our figure because we ran out of space to include it. Plus, it is consistent with proximal metaphysis data and does not affect the conclusion.

Author response image 4. Quantification of rBMAT in tibial diaphysis region.

Author response image 4.

k. Lines 220-222, "These data also indicate that expansion of BMAT is not sufficient to cause bone loss and that the correlation between elevated fracture risk and expansion of BMAT under a variety of clinical situations is not necessarily a causal relationship." This is an interesting and important point but is better suited to the Discussion section.

We moved this sentence into discussion.

l. Figure 3 (main figure and Supplemental figures):

i. Figure 3 Supp 1B vs 1K: Was glucose tolerance improved by CR? Fasting and peak glucose in the CR mice (1K) look similar to in the ad libitum mice (1B). It would be informative to calculate the AUC for the GTTs and to then plot this for all four groups on the same axis, comparing by 2-way ANOVA.

Because the AL and CR cohorts were independent, we are cautious to combine them together. In addition, they were lean mice with regular chow diet. The improvement of glucose metabolism may not be obvious at this case. Therefore, the AUC was calculated separately.

ii. In Figure 3 Supp 1O you show nicely that total BMAT volume is similar between KO and control during CR. Is BMAd size the same? i.e. do the KO mice still have larger BMAds than control mice during CR?

The representative images and quantification of adipocyte sizes are now included in Figure 3 —figure supplement 1Q-1S. “Although Pnpla2-/- mice fed ad libitum had increased rBMAT compared to controls (Figure 3 —figure supplement 1F and 1G), CR stimulated rBMAT expansion in control mice such that BMAT volume and BMAd size were comparable between genotypes (Figure 3 —figure supplement 1O-1S).”

iii. Lines 243-244: You state "we observed a trend (P = 0.07) towards reduced NEFA concentrations in bone marrow supernatant of CR BMAd-Pnpla2-/- mice". However, the same trend seems to occur for the AL mice (Supplemental 3I). Please can you add P values to Figure 3 Supp 1I so that the AL data can be compared more directly with glycerol and NEFA during CR (Figure 3 Supp 1R)? Better still would be to have all four groups compared on a single axis (as suggested above in General Point b), as this may give you sufficient power to detect a significant genotype effect on NEFA in the BM supernatant.

The P value for Figure 3 Supp 1I has been added. Again, we are cautious to put independent cohorts together to do the comparison.

iv. In line 255 you state that TRACP5b is decreased but from the figure this isn't significant, so please temper this statement in the main text. Alternatively, if you were to analyse the AL and CR mice together by 2-way ANOVA you might then have enough power to detect a significant decrease in the KO mice, irrespective of diet.

We have tempered this statement by saying “or showed a strong trend towards reduction…”

m. Was DAPI used for live/dead staining in your flow cytometry? This is not absolutely essential but should be stated in the Methods section if this was or was not done.

We did not use DAPI. Instead, dead cells and doublets were excluded based on FSC and SSC distribution.

n. Table 2: Please confirm that these P values are adjusted for multiple comparisons and update the Table legend to state how statistical significance was determined.

Multiple comparisons with FDR methods have been performed, adjusted P values are included in Tables 1 and 2.

o. Figure 3 —figure supplement 3:

i. BM adiposity is shown histologically in panel C but this is not quantified, so it's not clear to what extent this is altered by genotype and/or diet. Please can you quantify BM adiposity from these images? Even better would be to use osmium staining so that the female data could be compared with the male data in Figure 3 supplement 1.

Unfortunately, we did not perform osmium staining in this cohort. But we quantified the percentages of BMAT area in proximal tibial, please find the new Figure 3 —figure supplement 3C (right).

p. In Figure 5B-C and the related supplemental figures, what's the rationale for comparing CR KO mice to AL WT mice? I think this comparison is invalid because it is being made across two independent variables. For example, if the target gene expression is similar in CR WT vs CR KO, but (e.g.) lower in AL WT vs AL KO, then the fold change vs AL WT will be similar for CR WT and CR KO, but the fold change for CR KO vs AL KO will be greater. To my mind, this would mean that the KO is altering the effect of CR, but your approach would not detect this. So, if the goal is to identify genes regulated by CR irrespective of Pnpla2 deficiency then this should be done by comparing the effects of CR within each genotype.

We tried to compare with the same control to make sure the baseline is the same. As Reviewer noticed, the data set is very similar regardless of the control groups (Author response image 5) . We have corrected the comparison with AL KO, which does not change the following conclusion though.

Author response image 5. Comparison of gene set with different control groups.

Author response image 5.

q. The finding of impaired bone regeneration with CR and Pnpla2 KO is consistent with your conclusion, i.e. that BMAd lipolysis is important for bone regeneration. However, another interpretation relates to the findings of Ambrosi 2017, who show that BMAds impair fracture healing (Ambrosi et al., 2017). Their data suggest that BMAds can secrete DPP4 and that this impairs bone healing. Therefore, another possibility for your observation is that increased BMAT in the Pnpla2 KO mice results in increased production of DPP4 in the bone marrow, which impairs bone regeneration. Please can you measure DPP4 expression within the BM and/or discuss this possibility in the Discussion section?

This is an interesting point. However, we don’t find differences in Dpp4 expression between BMAd-Pnpla2+/+ and BMAd-Pnpla2-/- mice, although it is significantly inhibited by CR (Author response image 6) .

Author response image 6. Z-scores of Dpp4 expression in BMAT in response to CR and Pnpla2 deficiency.

Author response image 6.

r. Line 453: Please correct 'Figure 4I' to 'Figure 4H'. Also, you can't really state that BMD declines when this effect is not statistically significant; can you test this further (e.g. use 2-way ANOVA and/or in a second cohort of mice), or at least temper the language used to describe this effect?

Figure 6I is corrected into 6H. We tempered the tone of our statement to “trabecular bone volume fraction declined with cold exposure in BMAd-Pnpla2-/- mice and bone mineral density showed a similar trend (Figure 6H).”

s. You show that myelopoiesis is impaired by BMAd-specific Pnpla2 deficiency, but do not go into the mechanism about why only the myeloid system, and not the CLP or HSC (which are also in the bone marrow), is dependent on energy supply from BMAds under CR. Please can you speculate on this in the Discussion?

There is complementary interplay between epigenetic regulation and fatty acid metabolism that is mediated by exogenous lipid oxidation directly altering methylation states and by the provision of acetyl-CoA for acetylation (Ivashkiv and Park, 2016). The mechanisms by which adaptation to altered nutrient availability may specifically regulates development of myeloid lineages is a fascinating subject; however, it’s beyond the purview of this manuscript.

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Associated Data

    This section collects any data citations, data availability statements, or supplementary materials included in this article.

    Data Citations

    1. Li Z, Yu H, MacDougald O. 2021. Bone marrow adipocyte (BMAd)-specific deletion of Pnpla2 reveals local roles for lipolysis to fuel cells of bone and the marrow niche. NCBI Gene Expression Omnibus. GSE183784

    Supplementary Materials

    Figure 1—figure supplement 2—source data 1. Insertion of IRES-Cre cassette in the 3'UTR of endogenous Adipoq decreases expression of adiponectin but does not cause a metabolic or bone phenotype.
    Figure 2—source data 1. Ablation of adipose triglyceride lipase (ATGL; gene name Pnpla2) increases size and number of BMAd.
    Figure 3—source data 1. BMAd lipolysis is required to maintain bone homeostasis in male mice under CR conditions, but not when mice are fed ad libitum.
    Figure 3—figure supplement 1—source data 1. Blocking BMAd-lipolysis does not influence global metabolism when mice are fed ad libitum or calorically restricted.
    Figure 3—figure supplement 2—source data 1. Cortical bone variables in BMAd-Pnpla2-/- mice and other possible mechanisms for bone loss in BMAd-Pnpla2-/- CR mice.
    Figure 3—figure supplement 3—source data 1. BMAd lipolysis is not required in female mice to maintain bone homeostasis under CR conditions.
    Figure 3—figure supplement 4—source data 1. BMAd-lipolysis impairment in estrogen-deficient female mice does not affect CR-induced bone changes.
    Figure 4—source data 1. BMAd-Pnpla2 deficiency impairs myelopoiesis.
    Figure 4—figure supplement 1—source data 1. Flow cytometry strategies for hematopoietic cells and sublethal irradiation-induced hematopoietic regeneration in BMAd-Pnpla2-/- mice.
    Figure 5—source data 1. BMAd-Pnpla2 deficiency causes extensive alterations to the bone marrow transcriptome only when coupled with CR.
    elife-78496-fig5-data1.xlsx (230.4KB, xlsx)
    Figure 5—figure supplement 2—source data 1. BMAd-Pnpla2 deficiency causes extensive alterations to the bone marrow transcriptome only when coupled with CR.
    Figure 6—source data 1. Energy from BMAd is required for trabecular bone regeneration and protects against bone loss caused by chronic cold exposure.
    Figure 6—figure supplement 1—source data 1. Energy from BMAd protects against changes in trabecular microstructures caused by chronic cold exposure.
    Supplementary file 1. BMAd-lipolysis deficiency has subtle effects on circulating mature blood cells.

    Whole blood from male mice at 24 weeks of age fed ad libitum (top) or a 30% CR diet for 6weeks (bottom) was submitted for complete blood counts (CBC). White- and red- blood cell related parameters are shown. Multiple unpaired t tests had been performed crossing all parameters, P values were adjusted for multiple comparisons using Two-stage step-up (Benjamini, Krieger, and Yekutieli) with FDR method.

    elife-78496-supp1.docx (27.7KB, docx)
    Supplementary file 2. BMAd-lipolysis deficiency causes mild changes in bone marrow hematopoietic cells.

    Femoral bone marrow cells from male mice at 24 weeks of age fed ad libitum (top) or a 30% CR diet for 6 weeks (bottom) were collected and stained with antibodies for flow cytometry analyses. Mature blood cells and hematopoietic stem/progenitor cells (HSPCs) were counted. Multiple unpaired t tests had been performed crossing all parameters, P values were adjusted for multiple comparisons using Two-stage step-up (Benjamini, Krieger, and Yekutieli) with FDR method.

    elife-78496-supp2.docx (30.4KB, docx)
    Supplementary file 3. PCR primer list.
    elife-78496-supp3.docx (15.7KB, docx)
    MDAR checklist

    Data Availability Statement

    The accession number for the BMAT bulk RNA seq data reported in this paper is GEO: GSE183784.

    The following dataset was generated:

    Li Z, Yu H, MacDougald O. 2021. Bone marrow adipocyte (BMAd)-specific deletion of Pnpla2 reveals local roles for lipolysis to fuel cells of bone and the marrow niche. NCBI Gene Expression Omnibus. GSE183784


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