Table 8.
The scores calculated by different docking methodologies used in the present study with their rescoring values calculated by MMGBSA method.
C |
PDB ID: 3AOI |
|||
---|---|---|---|---|
D.S. (XP) kcal/mol |
D.S. (SP) kcal/mol |
D.S. (HTVS) kcal/mol |
dG bind kcal/mol |
|
18g | −11.172 | −10.443 | −10.65 | −81.31 |
13b1 | −10.242 | −9.519 | −7.85 | −74.62 |
19e | −11.07 | −11.73 | −6.38 | −83.57 |
19a | −10.77 | −11.47 | −9.26 | −80.57 |
16b | −9.21 | −11.36 | −10.78 | −84.33 |
16a | −9.26 | −11.30 | −11.47 | −81.96 |
15b | −9.05 | −11.09 | −9.24 | −89.31 |
ARRY-403 | −10.259 | −10.101 | −9.26 | −72.62 |
RO-5305552 | −6.707 | −9.074 | −7.75 | −39.15 |
Piragliatin | −8.345 | −8.144 | −7.24 | −39.35 |
Glucokinase activator 1 | −3.36 | −5.782 | −8.37 | −0.96 |
ZINC08974524 | −8.43 | −11.17 | −10.26 | −19.55 |
ZINC00656909 | −8.715 | −10.887 | −8.62 | −56.96 |
ZINC31812808 | −8.40 | −8.223 | −9.37 | −76.4 |
ZINC14791611 | −8.294 | −10.879 | −8.28 | −29.58 |
ZINC05204145 | −7.984 | −7.323 | −8.32 | −53.31 |
ZINC01114130 | −7.854 | −10.21 | −9.65 | −37.62 |
ZINC09712705 | −7.764 | −8.962 | −9.78 | −47.96 |
ZINC14462664 | −7.65 | −10.997 | −7.47 | −75.4 |
ZINC02474054 | −6.186 | −4.208 | −6.25 | −8158 |
D.S.: Docking score; XP: Extra precision; SP: Standard precision; HTVS: High-throughput virtual screening.