TABLE 1.
Summarized parameters of predicted miRNA families in cluster bean.
| Predicted miRNA family | AU | GC | Nucleotide content | Pre-miRNA sequence length | MFE | MFEI |
|---|---|---|---|---|---|---|
| miR1044 | 70.13 | 29.87 | A(39)U(69)G(26)C(20)N(0) | 154 | −30.3 | −0.65 |
| miR1109 | 69.93 | 30.07 | A(39)U(54)G(23)C(17)N(0) | 133 | −27.8 | −0.69 |
| miR1132 | 62.86 | 37.14 | A(10)U(12)G(8)C(5)N(0) | 35 | −12.8 | −0.98 |
| miR1134 | 66.08 | 33.92 | A(20)U(17)G(9)C(10)N(0) | 56 | −12.5 | −0.65 |
| miR1167 | 58.7 | 41.3 | A(14)U(13)G(11)C(8)N(0) | 46 | −16.2 | −0.85 |
| miR1313 | 64.9 | 35.1 | A(26)U(35)G(17)C(16)N(0) | 94 | −22.9 | −0.69 |
| miR1439 | 80.07 | 19.93 | A(240)U(233)G(50)C(68)N(1) | 592 | −75.3 | −0.63 |
| miR1527 | 63.05 | 36.95 | A(18)U(11)G(7)C(10)N(0) | 46 | −11 | −0.64 |
| miR1533 | 83.12 | 16.88 | A(35)U(29)G(8)C(5)N(0) | 77 | −9.9 | −0.761 |
| miR1535 | 42.07 | 57.93 | A(22)U(39)G(41)C(43)N(0) | 145 | −51.6 | −0.61 |
| miR156 | 56.96 | 43.04 | A(48)U(38)G(31)C(34)N(0) | 151 | −38.4 | −0.59 |
| miR168 | 47.92 | 52.08 | A(12)U(11)G(13)C(12)N(0) | 48 | −16.6 | −0.66 |
| miR169 | 56.9 | 43.1 | A(17)U(16)G(13)C(12)N(0) | 58 | −15.9 | −0.63 |
| miR172 | 62.5 | 37.5 | A(19)U(16)G(9)C(12)N(0) | 56 | −14.7 | −0.7 |
| miR1852 | 56.1 | 43.9 | A(19)U(26)G(22)C(14)N(1) | 82 | −21.9 | −0.6 |
| miR1857 | 57.78 | 42.22 | A(9)U(17)G(13)C(6)N(0) | 45 | −11.8 | −0.62 |
| miR2082 | 52.64 | 47.36 | A(12)U(18)G(19)C(8)N(0) | 57 | −18.66 | −0.66 |
| miR2098 | 65.52 | 34.48 | A(19)U(38)G(20)C(10)N(0) | 87 | −21.1 | −0.7 |
| miR2105 | 63.81 | 36.19 | A(30)U(37)G(22)C(16)N(0) | 105 | −27.7 | −0.72 |
| miR2275 | 47.7 | 52.3 | A(16)U(15)G(16)C(18)N(0) | 65 | −21.3 | −0.62 |
| miR2606 | 57.5 | 42.5 | A(10)U(13)G(9)C(8)N(0) | 40 | −10.2 | −0.6 |
| miR2628 | 41.09 | 58.91 | A(21)U(22)G(21)C(9)N(0) | 73 | −18.6 | −0.62 |
| miR2634 | 74.29 | 25.71 | A(10)U(16)G(5)C(4)N(0) | 35 | −12.3 | −1.36 |
| miR2866 | 64.95 | 35.05 | A(19)U(43(G(17)C(17)N(1) | 97 | −21.1 | −0.62 |
| miR2919 | 63.24 | 36.76 | A(21)U(22)G(16)C(9)N(0) | 68 | −22.2 | −0.888 |
| miR393 | 53.85 | 46.15 | A(11)U(17)G(13)C(11)N(0) | 52 | −16.2 | −0.67 |
| miR396 | 61.23 | 38.77 | A(10)U(20)G(10)C(9)N(0) | 49 | −16.5 | −0.86 |
| miR397 | 54.17 | 45.83 | A(8)U(18)G(10)C(12)N(0) | 48 | −14 | −0.63 |
| miR3979 | 60 | 40 | A(11)U(16)G(8)C(10)N(0) | 45 | −11.2 | −0.62 |
| miR399 | 57.15 | 42.85 | A(14)U(10)G(10)C(8)N(0) | 42 | −13.3 | −0.73 |
| miR414 | 49.11 | 50.89 | A(34)U(21)G(29)C(28)N(0) | 112 | −33.4 | −0.6 |
| miR437 | 58.74 | 41.26 | A(18)U(19)G(16)C(10)N(0) | 63 | −21.4 | −0.82 |
| miR4413 | 68.43 | 31.57 | A(21)U(31)G(17)C(7)N(0) | 76 | −14.6 | −0.6 |
| miR444 | 63.83 | 36.17 | A(8)U(22)G(10)C(7)N(0) | 47 | −10.2 | −0.59 |
| miR4995 | 42.86 | 57.14 | A(13)U(14)G(18)C(18)N(0) | 63 | −23.7 | −0.65 |
| miR5015 | 54.24 | 45.76 | A(9)U(23)G(15)C(12)N(0) | 59 | −16.9 | −0.625 |
| miR5021 | 50 | 50 | A(12)U(11)G(14)C(9)N(0) | 46 | −16.2 | −0.7 |
| miR5079 | 76.93 | 23.07 | A(25)U(35)G(8)C(10)N(0) | 78 | −11 | −0.61 |
| miR5265 | 67.22 | 32.78 | A(24)U(17)G(11)C(9)N(0) | 61 | −13.8 | −0.69 |
| miR5267 | 68.75 | 31.25 | A(42)U(46)G(21)C(19)N(0) | 128 | −37.7 | −0.94 |
| miR5338 | 61.62 | 38.38 | A(90)U(85)G(64)C(45)N(0) | 284 | −69 | −0.63 |
| miR537 | 71.43 | 28.57 | A(12)U(18)G(10)C(2)N(0) | 42 | −8.3 | −0.69 |
| miR5489 | 52.31 | 47.69 | A(18)U(16)G(18)C(13)N(0) | 65 | −20.7 | −0.66 |
| miR5542 | 67.2 | 32.8 | A(36)U(48)G(30)C(11)N(0) | 125 | −25.2 | −0.6 |
| miR5565 | 39.55 | 60.45 | A(35)U(46)G(33)C(20)N(0) | 134 | −39.6 | −0.74 |
| miR5641 | 70.28 | 29.72 | A(22)U(30)G(14)C(8)N(0) | 74 | −21.3 | −0.96 |
| miR5658 | 81.82 | 18.18 | A(14)U(22)G(7)C(1)N(0) | 44 | −5.8 | −0.72 |
| miR5662 | 51.84 | 48.16 | A(108)U(75)G(91)C(80)N(1) | 355 | −103.2 | −0.6 |
| miR773 | 53.66 | 46.34 | A(6)U(16)G(12)C(7)N(0) | 41 | −16.2 | −0.85 |
| miR779 | 57.86 | 42.14 | A(29)U(41)G(33)C(18)N(0) | 121 | −31.1 | −0.609 |
| miR781 | 68.19 | 31.81 | A(9)U(21)G(9)C(5)N(0) | 44 | −13.1 | −0.93 |
| miR837 | 54.89 | 45.11 | A(29)U(44)G(30)C(30)N(0) | 133 | −38.4 | −0.63 |
| miR838 | 49.39 | 50.61 | A(138)U(144)G(150)C(139)N(0) | 571 | −177.3 | −0.613 |
| miR863 | 63.64 | 36.36 | A(13)U(15)G(9)C(7)N(0) | 44 | −10.8 | −0.67 |
| miR865 | 76.93 | 23.07 | A(22)U(18)G(4)C(8)N(0) | 52 | −8.7 | −0.72 |
| miR867 | 81.64 | 18.36 | A(45)U(35)G(9)C(9)N(0) | 98 | −17.6 | −0.9 |
| miR902 | 68.86 | 31.14 | A(20)U(22)G(11)C(8)N(0) | 61 | −12.7 | −0.66 |