TABLE 4.

List of predicted miRNA families in cluster bean.

Input sequence Id	Precurson start/Stop	Known mature miRNA sequence	Predicted miRNA sequence	Predicted miRNA family	Homolog miRNA
EG990325.1 GLE089_F01_003	554–644	5′:UGA​CAG​AAG​AAA​GAG​AGC​AC:3′	5′:UGA​GAG​AAG​AAA​GAG​AGG​AA:3′	miR156	ath-miR156h
EG980529.1 GLL073_G12_042	382–429	5′:UCG​CUU​GGG​CAG​AUC​GGG​AC:3′	5′:UCG​CUU​GGU​CAG​AUC​UGC​GC:3′	miR168	sof-miR168b
EG984942.1 GLE040_D12_045	201–258	5′:GAG​CCA​AGG​AUG​ACU​UGC​CGU:3′	5′:GAG​CCA​AGG​GUG​ACU​UAA​UGU:3′	miR169	vvi-miR169l
EG985097.1 GLE041_H10_033	324–379	5′:AGA​AUC​UUG​AUG​AUG​CUG​CAU:3′	5′:AGA​AUC​UUG​AUC​AUC​CUG​UGU:3′	miR172	gma-miR172b
EG987334.1 GLE062_E02_004	369–420	5′:UCC​AAA​GGG​AUC​GCA​UUG​AUC:3′	5′:UCC​AAA​GGG​AUC​GCA​UGU​CAC:3′	miR393	gma-miR393
EG978583.1 GLL055_H01_001	205–253	5′:UUC​CAC​AGC​UUU​CUU​GAA​CUU:3′	5′:UUU​CAC​AGC​UUU​CUU​GAU​UGU:3′	miR396	osa-miR396c
EG975619.1 GLL029_A09_040	413–460	5′:UCA​UUG​AGU​GCA​GCG​UUG​ACG:3′	5′:UCU​CUG​AAU​GCA​GCG​UUG​ACU:3′	miR397	pab-miR397
EG990966.1 GLE094_G01_002	207–248	5′:UGC​CAA​AGG​AGA​AUU​GCC​C:3′	5′:AUC​CAA​AGG​UGA​AUU​GCU​C:3′	miR399	tae-miR399
EG985485.1 GLE045_G03_010	317–428	5′:UCA​UCC​UCA​UCA​UCA​UCG​UCC:3′	5′:UUA​UCA​UCA​UCC​UCA​UCA​UCC:3′	miR414	osa-miR414
EG978745.1 GLL057_D04_013	137–199	5′:AAA​GUU​AGA​GAA​GUU​UGA​CUU:3′	5′:AUA​GCU​AGA​GAA​GUU​UGA​AAU:3′	miR437	osa-miR437
EG976745.1 GLL038_H10_033	311–357	5′:UGC​AGU​UGC​UGC​CUC​AAG​CUU:3′	5′:UUC​AUU​UGA​AGC​CUC​AAG​CUU:3′	miR444	osa-miR444a.2
EG978435.1 GLL054_D09_037	223–300	5′:UUG​AGG​UGU​UUC​UAC​AGG​CUA:3′	5′:UUG​AGG​AGU​UUC​UAC​AUU​CAA:3′	miR537	ppt-miR537a
EG989794.1 GLE084_D07_029	632–672	5′:UUU​GCU​UCC​AGC​UUU​UGU​CUC:3′	5′:UUU​GCU​UCC​AGC​UUU​GGU​UUG:3′	miR773	ath-miR773
EG985501.1 GLE045_H05_017	388–541	5′:UUG​UAG​UGC​AUA​UUU​GUU​UU:3′	5′:UUG​UUA​UGC​AUG​UUG​GUU​UU:3′	miR1044	ppt-miR1044
EG989165.1 GLE017_B06_023	380–512	5′:UAG​UGG​GAG​AUU​UUG​UGU​AAC:3′	5′:UAU​UGG​GAA​AUU​UUG​UGU​CGC:3′	miR1109	smo-miR1109
EG974827.1 GLL020_C10_038	335–369	5′:CAU​UAU​GGA​ACG​GAA​GGA​G:3′	5′:CAU​UAU​GGA​AAG​GAA​GGG​A:3′	miR1132	tae-miR1132
EG986974.1 GLE05_A06_024	36–91	5′:CAA​CAA​CAA​CAA​GAA​GAA​GAA​GAU:3′	5′:GAA​CAA​GAA​GAA​GAA​GAA​GAA​GAA:3′	miR1134	tae-miR1134
EG975778.1 GLL02_E10_036	44–89	5′:GGG​GUG​UGA​UGA​UUU​GAA​AC:3′	5′:UGG​GUG​UGA​GGA​UUU​GAG​AC:3′	miR1167	cre-miR1167
EG989769.1 GLE084_B06_023	158–251	5′:UAC​CAC​UGA​AAU​UAU​UGU​UCG:3′	5′:UUC​AAU​UGA​AAU​UAU​UGG​UCG:3′	miR1313	pta-miR1313
EG989141.1 GLE079_A10_040	161–752	5′:UUU​UGG​AAC​GGA​GUG​AGU​AUU:3′	5′:UUA​UGA​AAC​GGA​GUG​AGU​AAU:3′	miR1439	osa-miR1439
EG981106.1 GLL079_F10_035	51–96	5′:UAA​CUC​AAC​CUU​ACA​AAA​CC:3′	5′:GAA​CUC​AAG​CUA​ACA​AAA​CC:3′	miR1527	gma-miR1527
EG975750.1 GLL02_C09_038	453–529	5′:AUA​AUA​AAA​AUA​AUA​AUG​A:3′	5′:UUA​AUA​AAA​AUU​AUA​AAA​A:3′	miR1533	gma-miR1533
EG981151.1 GLL010_F06_019	47–191	5′:CUU​GUU​UGU​GGU​GAU​GUC​U:3′	5′:CUG​GUC​UGU​GGU​GCU​GUC​C:3′	miR1535	gma-miR1535
EG983098.1 GLL01_H03_009	96–177	5′:AUA​UGG​AUU​CAG​AAU​GCA​GGU:3′	5′:AUA​AGG​AAA​CAG​AAU​GCA​GGA:3′	miR1852	osa-miR1852
EG975952.1 GLL031_C04_014	116–160	5′:UGG​UUU​UUU​UGG​AGC​AUG​AGG:3′	5′:GGA​AUU​UUU​UGG​AGC​AGG​AGG:3′	miR1857	osa-miR1857
EG990914.1 GLE094_C01_006	644–700	5′:UGU​GUG​UUC​CGC​UUC​UUC​UUU:3′	5′:AGC​GUC​UUC​UGC​UUC​UUC​UUU:3′	miR2082	ppt-miR2082
EG983237.1 GLE021_H04_009	192–278	5′:CGG​UUU​GUC​AAG​CGG​AGU​GC:3′	5′:UGC​UUU​GUC​AAG​GGG​AGU​GU:3′	miR2098	osa-miR2098
EG978398.1 GLL054_A10_040	393–497	5′:UUG​UGA​UGU​GAA​UGA​UUC​AU:3′	5′:GGG​UGA​UGU​GAU​UGA​UUC​CU:3′	miR2105	osa-miR2105
EG987207.1 GLE061_C06_022	253–317	5′:AGG​AUU​AGA​GGG​ACU​UGA​ACC:3′	5′:ACG​CUU​CGA​GGG​ACU​UGA​AUC:3′	miR2275	zma-miR2275c
EG986569.1 GLE055_B02_007	573–612	5′:UAC​AAU​UCC​UUA​GGU​GCU​UUU:3′	5′:UUC​AGC​UCC​UUA​GGU​GCA​UUU:3′	miR2606	mtr-miR2606a
EG980814.1 GLL076_F12_043	210–282	5′:CAU​GAA​AGA​AUG​AUG​AGU​AA:3′	5′:CAG​GUG​AGA​AUG​AUG​AGG​AA:3′	miR2628	mtr-miR2628
EG983630.1 GLE027_H07_025	570–604	5′:UUU​AUU​CUC​AGU​UUG​UUG​CUC:3′	5′:UUU​AUU​CUC​AGU​UUU​UUG​AUC:3′	miR2634	mtr-miR2634
EG982808.1 GLL094_D08_029	586–682	5′:UCU​AGU​UUG​UGU​UCA​GCA​UC:3′	5′:UCU​AAU​UUG​UGU​UCA​CUU​UC:3′	miR2866	osa-miR2866
EG988391.1 GLE071_F12_043	404–471	5′:AAG​GGG​GGG​GGG​GGA​AAG​A:3′	5′:AGG​GGG​AGG​GGG​GGA​AAU​U:3′	miR2919	osa-miR2919
EG988087.1 GLE016_B04_015	180–224	5′:UCU​CUC​UCU​CCC​UUG​AAG​GC:3′	5′:UCA​CUC​UCU​CCC​UUG​CAG​UU:3′	miR3979	osa-miR3979
EG976112.1 GLL032_G08_026	113–188	5′:UAA​GAG​AAU​UGU​AAG​UCA​CU:3′	5′:UCA​CUG​AAU​UGU​AAG​UUA​CU:3′	miR4413	gma-miR4413b
EG986778.1 GLE057_B04_015	648–710	5′:AGG​CAG​UGG​CUU​GGU​UAA​GGG:3′	5′:AAG​CAG​UGG​CUU​GGU​CAA​GGC:3′	miR4995	gma-miR4995
EG986237.1 GLE051_H12_041	18–76	5′:UCU​GUU​GUU​GUU​GGU​GUU​AUG:3′	5′:UCU​GUU​GUU​GUU​GUU​GUU​GUU:3′	miR5015	ath-miR5015b
EG985015.1 GLE041_B08_031	5–586	5′:UGA​GAA​GAA​GAA​GAA​GAA​AA:3′	5′:GGA​GAA​GAA​GAG​AAA​GGA​AA:3′	miR5021	ath-miR5021
EG990900.1 GLE094_B02_007	644–721	5′:UUU​GGA​UCU​GUU​AUU​UUG​GUA​U:3′	5′:UUU​CUU​UCU​GUU​AUU​UUG​GAA​U:3′	miR5079	osa-miR5079
EG982261.1 GLL08_B02_007	154–214	5′:AAG​UGA​UGU​UGG​AAU​GGU​UA:3′	5′:UAG​UGA​AGU​UGG​AAU​AAU​UA:3′	miR5265	mtr-miR5265
EG981105.1 GLL079_F09_035	141–268	5′:AGG​CAU​UUG​CUA​GAA​UAC​ACC​CAC:3′	5′:AAG​GAU​UUG​CUA​AUA​UAC​ACC​CAC:3′	miR5267	mtr-miR5267a
EG987890.1 GLE067_G12_042	22–305	5′:UGA​AGC​UUC​AGU​UGG​UUG​UAU:3′	5′:AGA​AGC​UUC​AGU​UGG​UUU​UGA:3′	miR5338	osa-miR5338
EG989431.1 GLE017_D06_021	177–241	5′:CAG​GUG​UUC​UCG​AUG​GCU​UCC:3′	5′:CUA​GUG​AUU​UCG​AUG​GCU​UCC:3′	miR5489	osa-miR5489
EG977779.1 GLL049_B04_015	307–431	5′:UUU​GAG​AAG​GUA​UCA​UGA​GAU:3′	5′:UAU​GAG​AAU​GUA​UUA​UGA​GAU:3′	miR5542	osa-miR5542
EG986048.1 GLE050_B05_023	40–173	5′:UUG​UUU​GGA​UGU​UGU​CGG​A:3′	5′:UUG​UUU​GGA​UGC​UGA​UGG​U:3′	miR5565	sbi-miR5565e
EG983888.1 GLE02_H11_041	113–186	5′:UGG​AAG​AAG​AUG​AUA​GAA​UUA:3′	5′:UGG​AAG​AAG​AUG​UGA​AAA​UUA:3′	miR5641	ath-miR5641
EG985672.1 GLE047_E04_012	293–618	5′:AUG​AUG​AUG​AUG​AUG​AUG​AAA:3′	5′:AUG​AUG​AUG​AAG​AAG​AAG​AAG:3′	miR5658	ath-miR5658
EG984029.1 GLE031_E11_044	110–464	5′:AGA​GGU​GAC​CAU​UGG​AGA​UG:3′	5′:AGG​GGU​GAC​CGU​UGG​AGA​CU:3′	miR5662	ath-miR5662